Shinichi Sunagawa
Molecular Biology · 2010–2021
A researcher in the Science corpus: 25 papers; trusts 7 researchers and is trusted by 7 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 513 citations into it; #6,634 of 17,773 by trust here, #585 by citations
- Ecology — 216 citations into it; #5,155 of 10,717 by trust here, #330 by citations
- Plant Science — 50 citations into it
- Oceanography — 34 citations into it
Whom Shinichi Sunagawa trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- V. Weis
- Qi Zheng
- Hui Zou
- Trevor J. Hastie
- Robert Tibshirani
- Daniel R. Mende
- Michael Lesser
- Yongan Zhao
- Jed A. Fuhrman
- N. Perkins
Who trusts Shinichi Sunagawa overall
- Jaime Huerta-Cepas
- Stephen Nayfach
- Martin Steinegger
- Tom O. Delmont
- Kristoffer Forslund
- Daniel R. Mende
- Y. Bar-On
- Damian Szklarczyk
- Mincheol Kim
- Sean Powell
Papers from Shinichi Sunagawa's perspective
Ordered by how strongly the researchers Shinichi Sunagawa trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The COG database: an updated version includes eukaryotes
- A genomic perspective on protein families.
- Pharmacological and rAAV Gene Therapy Rescue of Visual Functions in a Blind Mouse Model of Leber Congenital Amaurosis (PLoS Medicine)
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- Addendum: Regularization and variable selection via the elastic net
- The COG database: a tool for genome-scale analysis of protein functions and evolution
- Accelerated Profile HMM Searches
- eggNOG: automated construction and annotation of orthologous groups of genes
Their papers
- Genomic variation landscape of the human gut microbiome (2012) — 855 citations
- Richness of human gut microbiome correlates with metabolic markers (2013) — 4,282 citations
- Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes (2014) — 1,064 citations
- Accurate and universal delineation of prokaryotic species (2013) — 329 citations
- Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer (2019) — 1,113 citations
- Towards standards for human fecal sample processing in metagenomic studies (2017) — 756 citations
- Structure and function of the global ocean microbiome (2015) — 2,530 citations
- eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences (2015) — 1,948 citations
- Eukaryotic plankton diversity in the sunlit ocean (2015) — 1,780 citations
- proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes (2016) — 124 citations
- An integrated catalog of reference genes in the human gut microbiome (2014) — 1,947 citations
- Enterotypes in the landscape of gut microbial community composition (2017) — 924 citations
- Structure and function of the global topsoil microbiome (2018) — 2,056 citations
- Plankton networks driving carbon export in the oligotrophic ocean (2016) — 751 citations
- Human gut microbes impact host serum metabolome and insulin sensitivity (2016) — 1,876 citations
- A global ocean atlas of eukaryotic genes (2018) — 329 citations
- Disentangling the effects of type 2 diabetes and metformin on the human gut microbiota (2015) — 1,506 citations
- Salt-responsive gut commensal modulates TH17 axis and disease (2017) — 1,140 citations
- Critical Assessment of Metagenome Interpretation: the second round of challenges (2021) — 314 citations
- Marine DNA viral macro- and micro-diversity from pole to pole (2019) — 703 citations