Kristoffer Forslund
Molecular Biology · 2007–2017
A researcher in the Science corpus: 15 papers; trusts 13 researchers and is trusted by 14 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 305 citations into it; #3,385 of 17,773 by trust here, #223 by citations
- Genetics — 55 citations into it
- Ecology — 44 citations into it
- Computational Biology & Bioinformatics — 39 citations into it; #361 of 660 by trust here, #34 by citations
Whom Kristoffer Forslund trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Sean R. Eddy
- Jaime Huerta-Cepas
- Eugene V. Koonin
- Stephen F. Altschul
- Robert C. Edgar
- Ivica Letunic
- Adrian M. Altenhoff
- Johannes Söding
- Robert D. Finn
- Peer Bork
Who trusts Kristoffer Forslund overall
- Jaime Huerta-Cepas
- Damian Szklarczyk
- Ivica Letunic
- Kira S. Makarova
- Adrian M. Altenhoff
- Natasha M. Glover
- Ting Zhang
- Petri Törönen
Papers from Kristoffer Forslund's perspective
Ordered by how strongly the researchers Kristoffer Forslund trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- The Pfam protein families database
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The COG database: an updated version includes eukaryotes
- A genomic perspective on protein families.
- Distinguishing homologous from analogous proteins.
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- Accelerated Profile HMM Searches
- eggNOG: automated construction and annotation of orthologous groups of genes
- TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
Their papers
- The Pfam protein families database (2007) — 15,542 citations
- The Pfam protein families database (2011) — 6,805 citations
- STRING v10: protein–protein interaction networks, integrated over the tree of life (2014) — 9,777 citations
- eggNOG v4.0: nested orthology inference across 3686 organisms (2013) — 618 citations
- Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper (2016) — 2,475 citations
- Standardised Benchmarking in the Quest for Orthologs (2016) — 213 citations
- A Phylogeny-Based Benchmarking Test for Orthology Inference Reveals the Limitations of Function-Based Validation (2014) — 20 citations
- eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences (2015) — 1,948 citations
- Gearing up to handle the mosaic nature of life in the quest for orthologs (2017) — 36 citations
- proGenomes: a resource for consistent functional and taxonomic annotations of prokaryotic genomes (2016) — 124 citations
- InParanoid 7: new algorithms and tools for eukaryotic orthology analysis (2009) — 674 citations
- Intestinal microbiome is related to lifetime antibiotic use in Finnish pre-school children (2016) — 637 citations
- Human gut microbes impact host serum metabolome and insulin sensitivity (2016) — 1,876 citations
- Disentangling the effects of type 2 diabetes and metformin on the human gut microbiota (2015) — 1,506 citations
- Salt-responsive gut commensal modulates TH17 axis and disease (2017) — 1,140 citations