Christian J. Stoeckert Jr.

Molecular Biology · 2001–2021

A researcher in the Science corpus: 18 papers; trusts 10 researchers and is trusted by 17 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 145 citations into it; #2,431 of 17,773 by trust here, #1,232 by citations
• Plant Science — 16 citations into it
• Genetics — 15 citations into it

Whom Christian J. Stoeckert Jr. trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. John Quackenbush
2. Jianbo Shi
3. Alan J. Filipski
4. Eugene V. Koonin
5. Li Li
6. Anton J. Enright

Who trusts Christian J. Stoeckert Jr. overall

1. Adrian M. Altenhoff
2. Stijn van Dongen
3. Amborella Genome
4. David M. Emms
5. Feng Chen
6. Ya Yang
7. Christophe Dessimoz
8. Narendrakumar M. Chaudhari
9. Aaron J. Mackey
10. Jaime Huerta-Cepas

Papers from Christian J. Stoeckert Jr.'s perspective

Ordered by how strongly the researchers Christian J. Stoeckert Jr. trusts endorse each paper. Same corpus, a different order for every researcher.

1. Distinguishing homologous from analogous proteins.
2. Basic local alignment search tool.
3. The COG database: new developments in phylogenetic classification of proteins from complete genomes (Nucleic Acids Res.)
4. Entrez Gene: gene-centered information at NCBI (Nucleic Acids Res.)
5. Normalized cuts and image segmentation
6. Genome sequence of the human malaria parasite Plasmodium falciparum (Nature)
7. Initial sequencing and comparative analysis of the mouse genome (Nature)
8. A genomic perspective on protein families.
9. BLAT--the BLAST-like alignment tool. (Genome Research)
10. The COG database: a tool for genome-scale analysis of protein functions and evolution

Their papers

• OrthoMCL: identification of ortholog groups for eukaryotic genomes. (2003) — 5,762 citations
• OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups (2005) — 902 citations
• Minimum information about a microarray experiment (MIAME)—toward standards for microarray data (2001) — 4,236 citations
• Comparative analysis of RNA-Seq alignment algorithms and the RNA-Seq unified mapper (RUM) (2011) — 356 citations
• PlasmoDB: a functional genomic database for malaria parasites (2008) — 1,194 citations
• Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project (2008) — 565 citations
• Design and implementation of microarray gene expression markup language (MAGE-ML) (2002) — 491 citations
• Promoter features related to tissue specificity as measured by Shannon entropy (2005) — 464 citations
• PlasmoDB: the Plasmodium genome resource. A database integrating experimental and computational data (2003) — 379 citations
• The Ontology for Biomedical Investigations (2016) — 373 citations
• Using OrthoMCL to assign proteins to OrthoMCL-DB groups or to cluster proteomes into new ortholog groups (2011) — 450 citations
• PPARgamma and C/EBP factors orchestrate adipocyte biology via adjacent binding on a genome-wide scale. (2008) — 826 citations
• VEuPathDB: the eukaryotic pathogen, vector and host bioinformatics resource center (2021) — 378 citations
• FungiDB: An Integrated Bioinformatic Resource for Fungi and Oomycetes (2018) — 326 citations
• FungiDB: an integrated functional genomics database for fungi (2011) — 332 citations
• TriTrypDB: a functional genomic resource for the Trypanosomatidae (2009) — 966 citations
• Comparative genomics of the neglected human malaria parasite Plasmodium vivax (2008) — 820 citations
• ToxoDB: an integrated Toxoplasma gondii database resource (2007) — 490 citations