Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project

By Chris F. Taylor, Dawn Field, S. Sansone, Jan Aerts, Rolf Apweiler, Michael Ashburner, C. Ball, P. Binz, M. Bogue, Tim Booth and 47 more. Nature Biotechnology, 2008

565 citations recorded by the source corpus.

Subfields: Information Systems, Information Systems and Management, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/55a12da76f19defbf66f4bdb08887fea591d3e34

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Information Systems

1. Douglas B. Kell
2. Richard H. Scheuermann
3. Ryan Remy Brinkman
4. Frederick P. Roth
5. M. Murphy

In Information Systems and Management

1. Douglas B. Kell

In Molecular Biology

1. C. Turner
2. Caren S. Goldberg
3. K. Deiner
4. P. F. Thomsen
5. David S. Pilliod
6. Haiyuan Yu
7. Darren J. Wilkinson
8. Marc Vidal

Citations in the corpus

• High-Content Screening for Quantitative Cell Biology. (2016, background): “To date, there is no systematic reporting standard proposed for HCS through the MIBBI Foundry [56], which hosts a common portal of minimum information checklists for various disciplines.”
• The Library of Integrated Network-based Cellular Signatures (LINCS) NIH Program: System-level Cataloging of Human Cells Response to Perturbations (2017, background): “, 2010), Minimum Information for Biological and Biomedical Investigations efforts (Taylor et al., 2008), and NCBI PubChem (Bolton et al.”
• Metabolomics in pesticide research and development: review and future perspectives (2011, background): “Nonetheless, the incomplete knowledge of plant metabolic pathways and the lack of uniform analytical protocols for metabolomics are downsides that need be overcome for the standardization of metabolomics (Sansone et al. 2007; Sumner et al. 2007; Taylor et al. 2008).”
• Controlled vocabularies and semantics in systems biology (2011, background): “Examples of such Minimum Information checklists are hosted on the MIBBI portal (Taylor et al, 2008).”
• Literature-curated protein interaction datasets (2009, background): “These for large-scale biology data are under development 59 , and their development is wholeheartedly endorsed by the biocuration community so as to reduce curation error 30 .”
• Critical considerations for the application of environmental DNA methods to detect aquatic species (2016, background): “Progress through such periods accelerates when scientists publish detailed information about their field, laboratory and bioinformatic procedures (Taylor et al. 2008).”
• The Ontology for Biomedical Investigations (2016, methodology): “This situation created difficulties for representing cross-disciplinary experiments, for example, integrative meta-analysis spanning multiple scientific communities[3, 4].”
• mzML—a Community Standard for Mass Spectrometry Data (2010, background): “Minimal information assurance in all the relevant formats on the other hand is coordinated through the MIBBI project (38).”