Masaru Tomita
Molecular Biology · 2001–2013
A researcher in the Science corpus: 11 papers; trusts 3 researchers and is trusted by 4 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 60 citations into it; #5,712 of 17,773 by trust here, #1,398 by citations
- Computational Theory and Mathematics — 5 citations into it
Whom Masaru Tomita trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Masaru Tomita overall
Papers from Masaru Tomita's perspective
Ordered by how strongly the researchers Masaru Tomita trusts endorse each paper. Same corpus, a different order for every researcher.
- Metabolomic database annotations via query of elemental compositions: Mass accuracy is insufficient even at less than 1 ppm (BMC Bioinformatics)
- Seven Golden Rules for heuristic filtering of molecular formulas obtained by accurate mass spectrometry (BMC Bioinformatics)
- XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. (Analytical Chemistry)
- LIGAND: database of chemical compounds and reactions in biological pathways (Nucleic Acids Res.)
- Emerging molecular markers of cancer (Nature Reviews. Cancer)
- HMDB: the Human Metabolome Database (Nucleic Acids Res.)
- Protein turnover via autophagy: implications for metabolism. (Annual review of nutrition)
- Polyamines and cancer: old molecules, new understanding (Nature Reviews. Cancer)
- TM4: a free, open-source system for microarray data management and analysis. (BioTechniques)
- Dynamic modeling of gene expression data. (Proceedings of the National Academy of Sciences of the United States of America)
Their papers
- Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection (2006) — 8,212 citations
- The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models (2003) — 3,331 citations
- Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells (2013) — 4,885 citations
- Quantitative metabolome analysis using capillary electrophoresis mass spectrometry. (2003) — 940 citations
- Quantitative metabolome profiling of colon and stomach cancer microenvironment by capillary electrophoresis time-of-flight mass spectrometry. (2009) — 909 citations
- Whole-cell simulation: a grand challenge of the 21st century. (2001) — 343 citations
- Multiple High-Throughput Analyses Monitor the Response of E. coli to Perturbations (2007) — 689 citations
- Dynamic modeling of genetic networks using genetic algorithm and S-system (2003) — 430 citations
- Differential Metabolomics Reveals Ophthalmic Acid as an Oxidative Stress Biomarker Indicating Hepatic Glutathione Consumption* (2006) — 677 citations
- Capillary electrophoresis mass spectrometry-based saliva metabolomics identified oral, breast and pancreatic cancer-specific profiles (2009) — 946 citations
- Phase transfer surfactant-aided trypsin digestion for membrane proteome analysis. (2008) — 613 citations