Dynamic modeling of genetic networks using genetic algorithm and S-system

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Analog Genetic Encoding for the Evolution of Circuits and Networks (2007, background): “of the most promising approaches for the fulfillment of this objective [1]–[3].”
Decoupling dynamical systems for pathway identification from metabolic profiles (2004, methodology): “This situation is comparable to experimentally testing the same pathway under different conditions, such as different substrate availability, and has recently been employed by other investigators with similar goals ( e.g. , Kikuchi et al. , 2003; Torralba et al. , 2003; Veflingstad et al. , 2003).”
√n-consistent parameter estimation for systems of ordinary differential equations : bypassing numerical integration via smoothing (2010, neutral): “One example is furnished by [27], where a system that consists of five differential equations and contains sixty parameters and that describes a simple gene regulatory network from [21] is considered.”
Recent Developments in Parameter Estimation and Structure Identification of Biochemical and Genomic Systems (2009, methodology): “five-variable datasets that required 70,000 PC hours [134], Kimura and co-workers ran the algorithm on a single CPU, where it re-”