Leonid A. Mirny
Molecular Biology · 1996–2019
A researcher in the Science corpus: 19 papers; trusts 20 researchers and is trusted by 25 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 305 citations into it; #1,735 of 17,773 by trust here, #1,112 by citations
- Plant Science — 100 citations into it; #2,195 of 8,232 by trust here, #354 by citations
- Genetics — 58 citations into it; #6,818 of 6,854 by trust here, #2,093 by citations
- Computer Networks and Communications — 10 citations into it
- Biomedical Engineering — 7 citations into it
- Hardware and Architecture — 5 citations into it
Whom Leonid A. Mirny trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- S. Miyazawa
- Manfred J. Sippl
- William R. Taylor
- Eugene I. Shakhnovich
- Robert L. Jernigan
- David C. Jones
- Job Dekker
- Harold A. Scheraga
- Paul D. Thomas
- Maxim Imakaev
Who trusts Leonid A. Mirny overall
- Santo Fortunato
- Réka Albert
- Paul C. Bressloff
- Jae-Shick Yang
- Eugene I. Shakhnovich
- D. Thirumalai
- Torsten Schwede
- Xiaoli Li
- Andrew D. King
- William W. Chen
Papers from Leonid A. Mirny's perspective
Ordered by how strongly the researchers Leonid A. Mirny trusts endorse each paper. Same corpus, a different order for every researcher.
- A new approach to protein fold recognition
- Capturing Chromosome Conformation (Science)
- Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation
- SCOP: a structural classification of proteins database for the investigation of sequences and structures.
- A method to identify protein sequences that fold into a known three-dimensional structure.
- Calculation of conformational ensembles from potentials of mean force. An approach to the knowledge-based prediction of local structures in globular proteins.
- Engineering of stable and fast-folding sequences of model proteins.
- Residue-residue potentials with a favorable contact pair term and an unfavorable high packing density term, for simulation and threading.
- The Protein Data Bank.
- Cohesins functionally associate with CTCF on mammalian chromosome arms. (Cell)
Their papers
- Protein complexes and functional modules in molecular networks (2003) — 1,495 citations
- Protein knot server: detection of knots in protein structures (2007) — 97 citations
- Comprehensive mapping of long range interactions reveals folding principles of the human genome (2009) — 8,189 citations
- Organization of the mitotic chromosome (2013) — 943 citations
- Iterative Correction of Hi-C Data Reveals Hallmarks of Chromosome Organization (2012) — 1,380 citations
- Targeted degradation of CTCF decouples local insulation of chromosome domains from genomic compartmentalization (2017) — 1,522 citations
- Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data (2013) — 1,060 citations
- Two independent modes of chromatin organization revealed by cohesin removal (2017) — 1,066 citations
- Cooler: scalable storage for Hi-C data and other genomically-labeled arrays (2019) — 1,588 citations
- Super-resolution imaging reveals distinct chromatin folding for different epigenetic states (2016) — 801 citations
- A pathway for mitotic chromosome formation (2018) — 661 citations
- Intricate Knots in Proteins: Function and Evolution (2006) — 342 citations
- The 4D Nucleome Project (2017) — 658 citations
- How a protein searches for its site on DNA: the mechanism of facilitated diffusion (2009) — 359 citations
- HiGlass: web-based visual exploration and analysis of genome interaction maps (2017) — 1,864 citations
- Single-nucleus Hi-C reveals unique chromatin reorganization at oocyte-to-zygote transition (2017) — 693 citations
- Chromatin organization by an interplay of loop extrusion and compartmental segregation (2017) — 596 citations
- Formation of Chromosomal Domains by Loop Extrusion (2015) — 1,787 citations
- How to derive a protein folding potential? A new approach to an old problem. (1996)