D. Thirumalai

Molecular Biology · 2003–2009

A researcher in the Science corpus: 7 papers; trusts 13 researchers and is trusted by 13 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 28 citations into it; #3,943 of 17,773 by trust here, #8,570 by citations
• Computational Biology & Bioinformatics — 8 citations into it
• Atomic and Molecular Physics, and Optics — 7 citations into it

Whom D. Thirumalai trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Bernard Derrida
2. Leonid A. Mirny
3. Gad Getz
4. S. W. Lockless
5. Alfonso Valencia
6. Florencio Pazos
7. Anthony Fodor
8. Wenjun Zheng
9. Eugene I. Shakhnovich

Who trusts D. Thirumalai overall

1. Sheng Wang
2. S. Fatakia
3. Zhenxing Liu

Papers from D. Thirumalai's perspective

Ordered by how strongly the researchers D. Thirumalai trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Pfam protein families database
2. Estimation of effective interresidue contact energies from protein crystal structures: quasi-chemical approximation
3. Correlation of co-ordinated amino acid substitutions with function in viruses related to tobacco mosaic virus.
4. Coupled two-way clustering analysis of gene microarray data. (Proceedings of the National Academy of Sciences of the United States of America)
5. Correlated mutations contain information about protein-protein interaction.
6. How to derive a protein folding potential? A new approach to an old problem.
7. Reversible Unfolding of Single RNA Molecules by Mechanical Force (Science)
8. On Evolutionary Conservation of Thermodynamic Coupling in Proteins*
9. The way things move: looking under the hood of molecular motor proteins. (Science)
10. Insights into the molecular basis of leukocyte tethering and rolling revealed by structures of P- and E-selectin bound to SLe(X) and PSGL-1. (Cell)

Their papers

• Determination of network of residues that regulate allostery in protein families using sequence analysis (2006) — 83 citations
• Pair potentials for protein folding: Choice of reference states and sensitivity of predicted native states to variations in the interaction schemes (2008) — 337 citations
• Low-frequency normal modes that describe allosteric transitions in biological nanomachines are robust to sequence variations (2006) — 249 citations
• Asymmetry in the shapes of folded and denatured states of proteins (2003) — 166 citations
• Measuring the energy landscape roughness and the transition state location of biomolecules using single molecule mechanical unfolding experiments (2006) — 106 citations
• On the accuracy of inferring energetic coupling between distant sites in protein families from evolutionary imprints: Illustrations using lattice model (2009) — 36 citations
• Ribosome exit tunnel can entropically stabilize α-helices (2005) — 135 citations