Toni Gabaldón
Molecular Biology · 2005–2019
A researcher in the Science corpus: 15 papers; trusts 29 researchers and is trusted by 36 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 226 citations into it; #1,221 of 17,773 by trust here, #2,020 by citations
- Genetics — 96 citations into it; #697 of 6,854 by trust here, #694 by citations
- Plant Science — 62 citations into it
- Computational Biology & Bioinformatics — 33 citations into it
- Paleontology — 31 citations into it
- Ecology — 23 citations into it; #2,251 of 10,717 by trust here, #3,102 by citations
Whom Toni Gabaldón trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Robert C. Edgar
- Sean R. Eddy
- Eugene V. Koonin
- Stephen F. Altschul
- Temple F. Smith
- Stéphane Guindon
- Fredrik Ronquist
- Michael S. Waterman
- John P. Huelsenbeck
- Olivier Gascuel
Who trusts Toni Gabaldón overall
- Jaime Huerta-Cepas
- Adrian M. Altenhoff
- Hernán Dopazo
- Natasha M. Glover
- Kristoffer Forslund
- Joaquín Dopazo
- Asha J. Dissanayake
- Damian Szklarczyk
- Christophe Dessimoz
- Uyen Mai
Papers from Toni Gabaldón's perspective
Ordered by how strongly the researchers Toni Gabaldón trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- The Pfam protein families database
- Distinguishing homologous from analogous proteins.
- Identification of common molecular subsequences.
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- A genomic perspective on protein families.
- Amino acid substitution matrices from protein blocks.
- A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach.
- The COG database: an updated version includes eukaryotes
- MrBayes 3: Bayesian phylogenetic inference under mixed models (Bioinform.)
Their papers
- eggNOG v4.0: nested orthology inference across 3686 organisms (2013) — 618 citations
- trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses (2009) — 11,188 citations
- Functional and evolutionary implications of gene orthology (2013) — 553 citations
- Standardised Benchmarking in the Quest for Orthologs (2016) — 213 citations
- The human phylome (2007) — 208 citations
- PhylomeDB v3.0: an expanding repository of genome-wide collections of trees, alignments and phylogeny-based orthology and paralogy predictions (2010) — 154 citations
- ETE: a python Environment for Tree Exploration (2010) — 396 citations
- Gearing up to handle the mosaic nature of life in the quest for orthologs (2017) — 36 citations
- Whole-genome analyses resolve early branches in the tree of life of modern birds (2014) — 1,780 citations
- Genome Sequence of the Pea Aphid Acyrthosiphon pisum (2010) — 1,258 citations
- The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) (2013) — 630 citations
- Advances and Applications in the Quest for Orthologs (2019) — 84 citations
- Evolution of proteins and proteomes: a phylogenetics approach (2005) — 40 citations
- Redundans: an assembly pipeline for highly heterozygous genomes (2015) — 452 citations
- The genome of melon (Cucumis melo L.) (2012) — 715 citations