L. Aravind
Molecular Biology · 2000–2015
A researcher in the Science corpus: 24 papers; trusts 16 researchers and is trusted by 9 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 206 citations into it; #4,299 of 17,773 by trust here, #232 by citations
- Computational Biology & Bioinformatics — 33 citations into it
- Materials Chemistry — 6 citations into it
Whom L. Aravind trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Stephen F. Altschul
- Steven Henikoff
- E. van Nimwegen
- Liisa Holm
- Jorja G. Henikoff
- Temple F. Smith
- John S. Mattick
- Robert C. Edgar
- John C. Wootton
- Michael Gribskov
Who trusts L. Aravind overall
- Kuo-Chen Chou
- Eugene V. Koonin
- Sean R. Eddy
- Robert C. Edgar
- Morgan N. Price
- Ruslan I. Sadreyev
- Anna R. Panchenko
- Hua Cheng
- G. Collins
- Martin Madera
Papers from L. Aravind's perspective
Ordered by how strongly the researchers L. Aravind trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- Identification of common molecular subsequences.
- Amino acid substitution matrices from protein blocks.
- Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements.
- Statistics of Local Complexity in Amino Acid Sequences and Sequence Databases
- Hidden Markov models for detecting remote protein homologies
- Use of Receiver Operating Characteristic (ROC) Analysis to Evaluate Sequence Matching
- Iterated profile searches with PSI-BLAST--a tool for discovery in protein databases.
- Hidden Markov models in computational biology. Applications to protein modeling.
- Generalized affine gap costs for protein sequence alignment
Their papers
- Initial sequencing and analysis of the human genome (2001) — 24,262 citations
- Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements. (2001) — 1,399 citations
- Conversion of 5-Methylcytosine to 5-Hydroxymethylcytosine in Mammalian DNA by MLL Partner TET1 (2009) — 5,619 citations
- The many faces of the helix-turn-helix domain: transcription regulation and beyond. (2005) — 640 citations
- Horizontal gene transfer in prokaryotes: quantification and classification. (2001) — 1,203 citations
- Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2 (2010) — 1,313 citations
- TETonic shift: biological roles of TET proteins in DNA demethylation and transcription (2013) — 866 citations
- Classification and evolution of P-loop GTPases and related ATPases. (2002) — 1,177 citations
- De-ubiquitination and ubiquitin ligase domains of A20 downregulate NF-κB signalling (2004) — 1,832 citations
- Genome of the Extremely Radiation-Resistant Bacterium Deinococcus radiodurans Viewed from the Perspective of Comparative Genomics (2001) — 737 citations
- Role of Rpn11 Metalloprotease in Deubiquitination and Degradation by the 26S Proteasome (2002) — 1,087 citations
- Evolutionary history and higher order classification of AAA+ ATPases. (2004) — 822 citations
- Role of Predicted Metalloprotease Motif of Jab1/Csn5 in Cleavage of Nedd8 from Cul1 (2002) — 732 citations
- Bacterial rhodopsin: evidence for a new type of phototrophy in the sea. (2000) — 1,450 citations
- Identification of paracaspases and metacaspases: two ancient families of caspase-like proteins, one of which plays a key role in MALT lymphoma. (2000) — 1,120 citations
- A Database of Bacterial Lipoproteins (DOLOP) with Functional Assignments to Predicted Lipoproteins (2006) — 301 citations
- DNA methylation on N6-adenine in C. elegans (2015) — 620 citations
- Structure of the Plasmodium 6-cysteine s48/45 domain (2012) — 83 citations
- Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean (2011) — 348 citations
- Small but versatile: the extraordinary functional and structural diversity of the β-grasp fold (2007) — 160 citations