Evolutionary history and higher order classification of AAA+ ATPases.

By Lakshminarayan M. Iyer, Detlef D. Leipe, Eugene V. Koonin, L. Aravind. Journal of Structural Biology, 2004

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Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes. (2006, background): “(3) The C2 caps are defined as inserts occurring in the linker immediately after strand S3 (Figure 3).”
The ancient Virus World and evolution of cells (2006, background): “Other proteins listed in Table 3 are not as common as JRC or S3H but still form multiple, unexpected connections between groups of viruses that otherwise appear to be unrelated.”
Crystal structures of the pilus retraction motor PilT suggest large domain movements and subunit cooperation drive motility. (2007, background): “The C-terminal domain (CTD), ~240 amino acids in length, contains the sequences commonly associated with NTPase activity in hexameric ATPases of the RecA superfamily (Figure 1), including the Walker A phosphate binding (P-) loop and a loosely defined Walker B Box for this ASCE (Additional Strand Cat”