Martin Madera
Molecular Biology · 2002–2011
A researcher in the Science corpus: 10 papers; trusts 11 researchers and is trusted by 6 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 115 citations into it; #4,971 of 17,773 by trust here, #1,339 by citations
- Computational Biology & Bioinformatics — 28 citations into it
- Evaluation & Benchmarks — 7 citations into it
Whom Martin Madera trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Anders Krogh
- Sean R. Eddy
- Kevin J. Karplus
- Steven E. Brenner
- John C. Wootton
- Stephen F. Altschul
- Alexey G. Murzin
- Julie Dawn Thompson
- David C. Jones
- Alejandro A. Schäffer
Who trusts Martin Madera overall
- Sean R. Eddy
- Marc A. Martí-Renom
- Steve L. Johnson
- Hashem A. Shihab
- Mallur Srivatsan Madhusudhan
- Andrej Sali
- Julian Gough
- Elon Portugaly
Papers from Martin Madera's perspective
Ordered by how strongly the researchers Martin Madera trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The Protein Data Bank.
- Hidden Markov models in computational biology. Applications to protein modeling.
- The Pfam protein families database
- Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships.
- Pfam: clans, web tools and services
- SCOP: a structural classification of proteins database for the investigation of sequences and structures.
- Basic local alignment search tool.
- The Distributed Annotation System (BMC Bioinformatics)
- Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements.
Their papers
- InterPro, progress and status in 2005 (2004) — 559 citations
- InterPro: the integrative protein signature database (2008) — 2,089 citations
- The Transcriptional Landscape of the Mammalian Genome (2005) — 3,572 citations
- InterPro in 2011: new developments in the family and domain prediction database (2011) — 1,139 citations
- New developments in the InterPro database (2007) — 542 citations
- A comparison of profile hidden Markov model procedures for remote homology detection. (2002) — 174 citations
- SUPERFAMILY—sophisticated comparative genomics, data mining, visualization and phylogeny (2008) — 474 citations
- The genome of the social amoeba Dictyostelium discoideum (2005) — 1,352 citations
- A Database of Bacterial Lipoproteins (DOLOP) with Functional Assignments to Predicted Lipoproteins (2006) — 301 citations
- AJCC Cancer Staging Manual (2002) — 17,665 citations