Peter F. Stadler
Molecular Biology · 1996–2019
A researcher in the Science corpus: 27 papers; trusts 17 researchers and is trusted by 28 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 263 citations into it; #1,412 of 17,773 by trust here, #802 by citations
- Genetics — 62 citations into it; #3,865 of 6,854 by trust here, #3,282 by citations
- Cancer Research — 47 citations into it
- Algorithms & Complexity — 7 citations into it
- Computational Chemistry & Drug Discovery — 5 citations into it; #324 of 425 by trust here, #407 by citations
Whom Peter F. Stadler trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Stuart A. Kauffman
- Ivo L. Hofacker
- Simon A. Levin
- Elena Rivas
- Miroslav Fiedler
- Sean R. Eddy
- D. Mathews
- Sam Griffiths-Jones
- Ye Ding
- Julie Dawn Thompson
Who trusts Peter F. Stadler overall
- Colin White
- Sam Nolen
- Nicholas C. Wu
- Yash Savani
- Ivo L. Hofacker
- Kazutaka Katoh
- Paul P. Gardner
- Thomas M. Smith
- Lei Dai
- Sayed Mohammad Ebrahim Sahraeian
Papers from Peter F. Stadler's perspective
Ordered by how strongly the researchers Peter F. Stadler trusts endorse each paper. Same corpus, a different order for every researcher.
- Basic local alignment search tool.
- An Extensive Class of Small RNAs in Caenorhabditis elegans (Science)
- Mfold web server for nucleic acid folding and hybridization prediction (Nucleic Acids Res.)
- The microRNAs of Caenorhabditis elegans. (Genes & Development)
- An Abundant Class of Tiny RNAs with Probable Regulatory Roles in Caenorhabditis elegans (Science)
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
- Rfam: an RNA family database
- A statistical sampling algorithm for RNA secondary structure prediction. (Nucleic Acids Research)
- Functional siRNAs and miRNAs exhibit strand bias. (Cell)
- Secondary structure alone is generally not statistically significant for the detection of noncoding RNAs (Bioinform.)
Their papers
- Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project (2007) — 5,374 citations
- Secondary structure prediction for aligned RNA sequences. (2002) — 682 citations
- ViennaRNA Package 2.0 (2011) — 4,877 citations
- Inferring Noncoding RNA Families and Classes by Means of Genome-Scale Structure-Based Clustering (2007) — 534 citations
- RNA Maps Reveal New RNA Classes and a Possible Function for Pervasive Transcription (2007) — 2,532 citations
- Fast and reliable prediction of noncoding RNAs (2005) — 737 citations
- Molecular evolution of a microRNA cluster. (2004) — 677 citations
- RNAcentral: a hub of information for non-coding RNA sequences (2018) — 303 citations
- The genome of the recently domesticated crop plant sugar beet (Beta vulgaris) (2013) — 630 citations
- Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures (2009) — 549 citations
- The primary transcriptome of the major human pathogen Helicobacter pylori (2010) — 1,168 citations
- MITOS: improved de novo metazoan mitochondrial genome annotation. (2013) — 4,939 citations
- Thermodynamics of RNA-RNA Binding (2006) — 389 citations
- tRNAdb 2009: compilation of tRNA sequences and tRNA genes (2008) — 791 citations
- Proteinortho: Detection of (Co-)orthologs in large-scale analysis (2011) — 1,086 citations
- Recombination Spaces, Metrics, and Pretopologies (2002) — 50 citations
- CREx: inferring genomic rearrangements based on common intervals (2007) — 334 citations
- Improved annotation of protein-coding genes boundaries in metazoan mitochondrial genomes (2019) — 661 citations
- metilene: fast and sensitive calling of differentially methylated regions from bisulfite sequencing data (2016) — 428 citations
- Sound–meaning association biases evidenced across thousands of languages (2016) — 473 citations