Julie Dawn Thompson

Molecular Biology · 1994–2017

A researcher in the Science corpus: 8 papers; trusts 2 researchers and is trusted by 19 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 50 citations into it; #2,678 of 17,773 by trust here, #908 by citations
• Computational Biology & Bioinformatics — 17 citations into it; #654 of 660 by trust here, #233 by citations

Whom Julie Dawn Thompson trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. W. Kabsch
2. Desmond G. Higgins
3. Toby J. Gibson
4. Robert C. Edgar
5. Nicola J. Mulder

Who trusts Julie Dawn Thompson overall

1. Kazutaka Katoh
2. J. Castresana
3. Barry G. Hall
4. Salvador Carranza
5. Christina A. Kellogg
6. Desmond G. Higgins
7. Sudhir Kumar
8. Fabian Sievers
9. Jimin Pei
10. J. Pramuk

Papers from Julie Dawn Thompson's perspective

Ordered by how strongly the researchers Julie Dawn Thompson trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Pfam protein families database
2. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
3. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
4. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
5. The InterPro Database, 2003 brings increased coverage and new features (Nucleic Acids Res.)
6. The Pfam protein families database
7. Progressive sequence alignment as a prerequisitetto correct phylogenetic trees
8. PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences
9. Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis (Science)
10. SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.

Their papers

• Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega (2011) — 15,106 citations
• Clustal W and Clustal X version 2.0 (2007) — 27,603 citations
• Multiple sequence alignment with the Clustal series of programs (2003) — 5,174 citations
• Multiple Sequence Alignment Using ClustalW and ClustalX (2003) — 2,955 citations
• BAliBASE 3.0: Latest developments of the multiple sequence alignment benchmark (2005) — 445 citations
• Insights into Ciliary Genes and Evolution from Multi-Level Phylogenetic Profiling (2017) — 59 citations
• The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. (1997)
• CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. (1994)