G. Vriend

Molecular Biology · 1990–2016

A researcher in the Science corpus: 22 papers; trusts 12 researchers and is trusted by 12 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 197 citations into it; #2,617 of 17,773 by trust here, #2,115 by citations
• Materials Chemistry — 80 citations into it; #2,023 of 11,513 by trust here, #3,689 by citations
• Computational Biology & Bioinformatics — 75 citations into it
• Spectroscopy — 40 citations into it; #515 of 1,674 by trust here, #1,109 by citations
• Computational Chemistry & Drug Discovery — 10 citations into it
• Natural Language Processing — 6 citations into it

Whom G. Vriend trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Rob W. W. Hooft
2. Christopher Sander
3. W. Kabsch
4. Elmar Krieger
5. Roman A. Laskowski
6. Kevin Cowtan
7. Liisa Holm
8. A. Brunger
9. Robbie P. Joosten

Who trusts G. Vriend overall

1. Elmar Krieger
2. Robbie P. Joosten
3. Álvaro González
4. András Szilágyi
5. Hans Senn
6. Rob W. W. Hooft
7. Vignir Ísberg
8. Sean R. McGuffee
9. Jens Erik Nielsen
10. Aneerban Bhattacharya

Papers from G. Vriend's perspective

Ordered by how strongly the researchers G. Vriend trusts endorse each paper. Same corpus, a different order for every researcher.

1. Errors in protein structures
2. The Protein Data Bank: a computer-based archival file for macromolecular structures.
3. Selection of representative protein data sets
4. PROCHECK: a program to check the stereochemical quality of protein structures
5. Database of homology‐derived protein structures and the structural meaning of sequence alignment
6. SRS: information retrieval system for molecular biology data banks.
7. Fast and efficient searching of biological data resources - using EB-eye
8. PDBselect 1992–2009 and PDBfilter-select
9. Crystallographic and biochemical investigation of the lead(II)-catalyzed hydrolysis of yeast phenylalanine tRNA.
10. Verification of protein structures : Side-chain planarity

Their papers

• A New Generation of Crystallographic Validation Tools for the Protein Data Bank (2011) — 445 citations
• A series of PDB related databases for everyday needs (2010) — 1,027 citations
• GPCRDB: an information system for G protein-coupled receptors (2013) — 507 citations
• PDB Improvement Starts with Data Deposition (2007) — 46 citations
• Increasing the precision of comparative models with YASARA NOVA—a self‐parameterizing force field (2002) — 1,507 citations
• Automatic rebuilding and optimization of crystallographic structures in the Protein Data Bank (2011) — 93 citations
• A text-mining analysis of the human phenome (2006) — 653 citations
• A series of PDB-related databanks for everyday needs (2014) — 828 citations
• MRS: a fast and compact retrieval system for biological data (2005) — 45 citations
• YASARA View—molecular graphics for all devices—from smartphones to workstations (2014) — 1,419 citations
• GPCRdb: an information system for G protein-coupled receptors (2015) — 377 citations
• GPCRdb: the G protein‐coupled receptor database – an introduction (2016) — 195 citations
• New ways to boost molecular dynamics simulations (2015) — 954 citations
• PredictProtein—an open resource for online prediction of protein structural and functional features (2014) — 539 citations
• Mutations in SMAD3 cause a syndromic form of aortic aneurysms and dissections with early-onset osteoarthritis (2011) — 689 citations
• WIWS: a protein structure bioinformatics Web service collection (2010) — 165 citations
• Human Dectin-1 Deficiency and Mucocutaneous Fungal Infections (2009) — 740 citations
• Making optimal use of empirical energy functions: Force‐field parameterization in crystal space (2004) — 846 citations
• Objectively judging the quality of a protein structure from a Ramachandran plot (1997)
• The PDBFINDER database: a summary of PDB, DSSP and HSSP information with added value (1996)