The small RNA profile during Drosophila melanogaster development.

By Alexei Aravin, M. Lagos‐Quintana, A. Yalçin, Mihaela Zavolan, Debora Marks, Ben Snyder, T. Gaasterland, Jutta Meyer, Thomas Tuschl. Developmental Cell, 2003

1,035 citations recorded by the source corpus.

Subfields: Cancer Research, Molecular Biology

View Paper: https://www.semanticscholar.org/paper/9cad0fb2991be25e485ebb9107dba3d4dd264c92

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Cancer Research

1. David P. Bartel
2. Phillip D. Zamore
3. Nikolaus Rajewsky
4. V. Narry Kim
5. Scott M. Hammond
6. E. Miska
7. Artemis G. Hatzigeorgiou
8. Eric C. Lai

In Molecular Biology

1. David P. Bartel
2. Phillip D. Zamore
3. V. Narry Kim
4. Gregory J. Hannon
5. Nikolaus Rajewsky
6. Scott M. Hammond
7. Thomas Tuschl
8. E. Miska

Citations in the corpus

• Genomics of microRNA. (2006, background): “Also useful is to look for stem-loops in the vicinity of known miRNA genes because more than half of known miRNA genes are present as tandem arrays within operon-like clusters [ 5 ,26,33].”
• Clustering and conservation patterns of human microRNAs (2005, background): “However, larger clusters were also identified, such as the human hsa-miR-17 cluster composed of six members (10,11), which is also conserved in other mammals (13), or the Drosophila melanogaster cluster of eight miRNA genes (12).”
• Human embryonic stem cells express a unique set of microRNAs. (2004, background): “The expression of miRNAs is often regulated in tissuespecific and developmental stage-specific manners (Aravin et al., 2003; Krichevsky et al., 2003; Lagos-Quintana et al., 2002; Pasquinelli et al., 2000; Sempere et al., 2003), although the regulatory mechanism is still largely unknown.”
• Principles of MicroRNA–Target Recognition (2005, methodology): “Drosophila miRNA sequences were from [44,50,51] downloaded from Rfam (http://www.”
• Discrete small RNA-generating loci as master regulators of transposon activity in Drosophila. (2007, neutral): “Indeed, maternally loaded rasiRNAs were detected in early embryos (Aravin et al., 2003), and their presence was correlated with suppression of hybrid dysgenesis in D. virilis (Blumenstiel and Hartl, 2005).”
• MIWI2 is essential for spermatogenesis and repression of transposons in the mouse male germline. (2007, background): “These are highly enriched for sequences that target repetitive elements and are therefore called rasiRNAs (repeat-associated siRNAs) (Aravin et al., 2003; Saito et al., 2006).”
• microRNA target predictions in animals (2006, background): “Large-scale attempts to profile miRNA expression in many tissues and during development have been published (see, for example, refs”
• Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes. (2006, result): “This preference was consistent with the trend observed in miRNAs (86%) and functional siRNAs (Aravin et al. 2003; Khvorova et al. 2003).”
• Small non-coding RNAs in animal development (2008, background): “melanogaster are repeat-associated small interfering RNAs ( rasiRNAs ), a family of RNAs with a sequence that corresponds to or is complementary to transposable element”
• Transposable elements and the epigenetic regulation of the genome (2007, background): “melanogaster , piRNAs are referred to as repeat-associated siRNAs, or rasiRNA”