Succession of microbial consortia in the developing infant gut microbiome

By Jeremy E. Koenig, A. Spor, Nicholas B. Scalfone, A. Fricker, Jesse Stombaugh, Rob Knight, Largus T. Angenent, Ruth E. Ley. Proceedings of the National Academy of Sciences of the United States of America, 2010

2,353 citations recorded by the source corpus.

Subfields: Food Science, Molecular Biology, Nutrition and Dietetics

View Paper: https://www.semanticscholar.org/paper/2d77d19f1f0a675658f8c069e622ad9b4517feee

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Citations in the corpus

Animal behaviour meets microbial ecology (2011, background): “Indeed, several recent studies have demonstrated quantitative variation among animal-associated bacterial communities using cultureindependent approaches (e.g. Grice et al. 2009; Yildirim et al. 2010; Claesson et al. 2011; Koenig et al. 2011).”
Defining the Human Microbiome (2012, background): “For example, as the infant began to receive a full adult diet, genes in the microbiome associated with vitamin biosynthesis and polysaccharide digestion became enriched[34].”
Human genetics shape the gut microbiome. (2014, neutral): “In a case study of the development of an infant’s gutmicrobiome (Koenig et al., 2011), Christensenellaceae was present at 8.”
Host remodeling of the gut microbiome and metabolic changes during pregnancy. (2012, methodology): “…to note that the V1V2 region primers used in this study are biased against Biﬁdobacteria [Kuczynski et al., 2012], an important component of the developing infant microbiota [Koenig et al., 2011], although this bias has been shown not to impact the diversity of other taxa [Sim et al., 2012].)”
Advancing our understanding of the human microbiome using QIIME (2013, background): “, 2011) and development (Dominguez-Bello et al., 2010; Koenig et al., 2011), and dysbiosis (or imbalance in these communities) is now known to be associated with disease, including obesity (Turnbaugh et al.”
Proteobacteria: A Common Factor in Human Diseases (2017, background): “Microorganisms colonization of the GIT begins at birth, with a dynamic microbiota that progressively stabilizes in the first years of life [10].”
The Central Nervous System and the Gut Microbiome (2016, background): “The infant microbiome is highly sensitive to various perturbations like changes in diet and antibiotic treatment (Bäckhed et al., 2015; Koenig et al., 2011; Yassour et al., 2016).”
Archaea and Fungi of the Human Gut Microbiome: Correlations with Diet and Bacterial Residents (2013, background): “The associations presented here, together with other work [49], [41], [13], allow the proposal of specific relationships between nutrition and microbial consortia within the human gut.”
A Novel Sparse Compositional Technique Reveals Microbial Perturbations (2019, background): “The second example is a case study of the gut colonization of an infant over time (41) (see Materials and Methods for detail).”