Mapping global histone acetylation patterns to gene expression.

By S. Kurdistani, Saeed Tavazoie, M. Grunstein. Cell, 2004

663 citations recorded by the source corpus.

Subfields: Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/2b50a8b93a266c7b4398f09f5bfd08b8e2f19e7a

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Citations in the corpus

Acetyl-CoA Induces Cell Growth and Proliferation by Promoting the Acetylation of Histones at Growth Genes (2011, background): “In support of this idea, the transcripts of OX phase genes peak very sharply in the midst of the respiratory burst and H3 acetylation has been shown to correlate with transcription rate (Figure 4B) (Kurdistani et al., 2004; Pokholok et al., 2005; Tu et al., 2005).”
Genome-wide dynamics of Htz1, a histone H2A variant that poises repressed/basal promoters for activation through histone loss. (2005, neutral): “Each complex also contains unique members (i.e., Spt3 for SAGA, Bdf1 for TFIID) which have been localized by genome-wide ChIP ( Kurdistani et al., 2004; Zanton and Pugh, 2004).”
Protocol for the fast chromatin immunoprecipitation (ChIP) method (2006, methodology): “Others have also used whole DNA (input) as a reference to estimate the enrichment of proteins at a genomic sit”
Multivalent engagement of chromatin modifications by linked binding modules (2007, background): “Histone hyperacetylation is correlated positively with actively transcribed chromati”
Nucleosome positioning and gene regulation: advances through genomics (2009, background): “Furthermore, antibodies that were specific for individual histone post-translational modifications showed that the promoter regions of highly transcribed genes were particularly enriched with nucleosomes that contained acetylated and methylated histone”
Histone variant H2A.Z marks the 5' ends of both active and inactive genes in euchromatin. (2005, background): “This is an attractive model because in addition to being important for antisilencing, Bdf1 is known to bind preferentially to acetylated forms of histone H4 and is enriched in intergenic regions throughout the genome (Kurdistani et al., 2004).”
Modeling gene expression using chromatin features in various cellular contexts (2012, neutral): “The correlation between histone modifications and expression is also found in yeast [8] and Arabidopsis thaliana [9].”
Mapping of genetic and epigenetic regulatory networks using microarrays (2005, background): “Similar strong correlations, in both intergenic and coding regions, were observed in a systematic ChIP-chip study of 11 different histone acetylation marks in budding yeas”
Loss of acetylation at Lys16 and trimethylation at Lys20 of histone H4 is a common hallmark of human cancer (2005, background): “; and it is associated with differential binding of transcription factor”
The role of chromatin during transcription. (2007, background): “Distinct patterns of lysine acetylation on histones have been proposed to specify distinct downstream functions such as the regulation of coexpressed genes (Kurdistani et al., 2004).”