Arend Sidow

Molecular Biology · 1994–2015

A researcher in the Science corpus: 15 papers; trusts 6 researchers and is trusted by 10 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 281 citations into it; #5,326 of 17,773 by trust here, #438 by citations
• Genetics — 72 citations into it; #4,939 of 6,854 by trust here, #1,019 by citations
• Artificial Intelligence — 9 citations into it
• Paleontology — 6 citations into it

Whom Arend Sidow trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Joseph Felsenstein
2. David Haussler
3. Michael Farrar
4. Adam C. Siepel
5. Hirohisa Kishino
6. Masami Hasegawa

Who trusts Arend Sidow overall

1. Bernease Herman
2. Xiaoming Liu

Papers from Arend Sidow's perspective

Ordered by how strongly the researchers Arend Sidow trusts endorse each paper. Same corpus, a different order for every researcher.

1. Distribution and intensity of constraint in mammalian genomic sequence. (Genome Research)
2. Control of developmental regulators by Polycomb in human embryonic stem cells. (Cell)
3. Transcriptional regulatory elements in the human genome. (Annual review of genomics and human genetics (Print))
4. Aligning multiple genomic sequences with the threaded blockset aligner. (Genome Research)
5. Transcriptional Maps of 10 Human Chromosomes at 5-Nucleotide Resolution (Science)
6. FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin. (Genome Research)
7. Scanning Human Gene Deserts for Long-Range Enhancers (Science)
8. Widespread occurrence of antisense transcription in the human genome (Nature Biotechnology)
9. Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs. (Cell)
10. Phylogenetic estimation of context-dependent substitution rates by maximum likelihood. (Molecular biology and evolution)

Their papers

• Distribution and intensity of constraint in mammalian genomic sequence. (2005) — 1,400 citations
• Architecture of the human regulatory network derived from ENCODE data (2012) — 1,495 citations
• Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project (2007) — 5,374 citations
• Genome sequence of the Brown Norway rat yields insights into mammalian evolution (2004) — 2,140 citations
• The ENCODE (ENCyclopedia Of DNA Elements) Project (2004) — 2,411 citations
• SHRiMP: Accurate Mapping of Short Color-space Reads (2009) — 635 citations
• Genome-Wide Analysis of Transcription Factor Binding Sites Based on ChIP-Seq Data (2008) — 762 citations
• ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia (2012) — 1,852 citations
• Determinants of nucleosome organization in primary human cells (2011) — 673 citations
• Identifying a High Fraction of the Human Genome to be under Selective Constraint Using GERP++ (2010) — 1,712 citations
• Single-nucleotide evolutionary constraint scores highlight disease-causing mutations (2010) — 208 citations
• A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. (2008) — 659 citations
• A User's Guide to the Encyclopedia of DNA Elements (ENCODE) (2011) — 1,042 citations
• Extensive sequencing of seven human genomes to characterize benchmark reference materials (2015) — 739 citations
• Parsimony or statistics? (1994)