Matteo Pellegrini
Molecular Biology · Nature · 1999–2015
A researcher in the Science corpus: 12 papers; trusts 12 researchers and is trusted by 5 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 132 citations into it; #5,321 of 17,773 by trust here, #3,311 by citations
- Plant Science — 51 citations into it; #6,779 of 8,232 by trust here, #692 by citations
- Computational Biology & Bioinformatics — 5 citations into it
Whom Matteo Pellegrini trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Florencio Pazos
- Stephen F. Altschul
- Alfonso Valencia
- Lars Juhl Jensen
- Edward M. Marcotte
- Michael J. Thompson
- Thomas L. Madden
- Michael Kuhn
- Alejandro A. Schäffer
- Todd O. Yeates
Who trusts Matteo Pellegrini overall
- H. Szurmant
- Martin Weigt
- Thomas G. Dietterich
- Jean-Philippe Vert
- Benjamin A. Shoemaker
- Alan J. Filipski
- Christophe Dessimoz
- David de Juan
- J. Walker
- Raphaël Leplae
Papers from Matteo Pellegrini's perspective
Ordered by how strongly the researchers Matteo Pellegrini trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The COG database: an updated version includes eukaryotes
- Assigning protein functions by comparative genome analysis: protein phylogenetic profiles.
- STRING: a database of predicted functional associations between proteins (Nucleic Acids Res.)
- Predicting protein function by genomic context: quantitative evaluation and qualitative inferences. (Genome Research)
- Protein function in the post-genomic era (Nature)
- Similarity of phylogenetic trees as indicator of protein-protein interaction. (Protein Engineering)
- STRING 8—a global view on proteins and their functional interactions in 630 organisms (Nucleic Acids Res.)
- Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome (Nature Genetics)
- Control of developmental regulators by Polycomb in human embryonic stem cells. (Cell)
Their papers
- Prolinks: a database of protein functional linkages derived from coevolution (2004) — 314 citations
- Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis. (2006) — 1,820 citations
- Using phylogenetic profiles to predict functional relationships. (2012) — 43 citations
- Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by Aid deficiency (2010) — 901 citations
- Relationship between nucleosome positioning and DNA methylation (2010) — 742 citations
- Pioneer Transcription Factors Target Partial DNA Motifs on Nucleosomes to Initiate Reprogramming (2015) — 725 citations
- Whole-Genome Analysis of Histone H3 Lysine 27 Trimethylation in Arabidopsis (2007) — 745 citations
- BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data (2013) — 400 citations
- From the Cover: Retrograde bilin signaling enables Chlamydomonas greening and phototrophic survival (2013) — 119 citations
- Conservation and divergence of methylation patterning in plants and animals (2010) — 1,199 citations
- Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning (2008) — 2,259 citations
- Assigning protein functions by comparative genome analysis: protein phylogenetic profiles. (1999)