Benjamin A. Shoemaker
Molecular Biology · 2000–2024
A researcher in the Science corpus: 15 papers; trusts 34 researchers and is trusted by 21 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 160 citations into it; #2,167 of 17,773 by trust here, #1,334 by citations
- Computational Theory and Mathematics — 54 citations into it; #8,877 of 12,182 by trust here, #232 by citations
- Computational Biology & Bioinformatics — 19 citations into it
- Materials Chemistry — 17 citations into it; #9,839 of 11,513 by trust here, #7,718 by citations
- Cell Biology — 7 citations into it
Whom Benjamin A. Shoemaker trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Joel S. Bader
- P. Bowers
- Michael Y. Galperin
- G. MacBeath
- Florencio Pazos
- Asa Ben-Hur
- James R. Bradford
- Bernhard Schölkopf
- Aron Marchler-Bauer
- Amitabha Chaudhuri
Who trusts Benjamin A. Shoemaker overall
- Sabry Razick
- Lukas Burger
- Yanjun Qi
- David A. Lee
- G. Magklaras
- Qiangfeng Cliff Zhang
- Vladimir N Uversky
- Ian M. Donaldson
- Peter Tompa
- Anna R. Panchenko
Papers from Benjamin A. Shoemaker's perspective
Ordered by how strongly the researchers Benjamin A. Shoemaker trusts endorse each paper. Same corpus, a different order for every researcher.
- A comprehensive two-hybrid analysis to explore the yeast protein interactome (Proceedings of the National Academy of Sciences of the United States of America)
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Functional organization of the yeast proteome by systematic analysis of protein complexes (Nature)
- Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry (Nature)
- Basic local alignment search tool.
- A Bayesian Networks Approach for Predicting Protein-Protein Interactions from Genomic Data
- A comprehensive analysis of protein–protein interactions in Saccharomyces cerevisiae (Nature)
- The Pfam protein families database
- Predicting protein function by genomic context: quantitative evaluation and qualitative inferences. (Genome Research)
- The Database of Interacting Proteins: 2004 update (Nucleic Acids Res.)
Their papers
- Deciphering Protein–Protein Interactions. Part II. Computational Methods to Predict Protein and Domain Interaction Partners (2007) — 364 citations
- Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. (2000) — 976 citations
- CDD: a database of conserved domain alignments with links to domain three-dimensional structure (2002) — 672 citations
- PubChem's BioAssay Database (2011) — 647 citations
- PubChem Substance and Compound databases (2015) — 4,892 citations
- CDD: a Conserved Domain Database for protein classification (2004) — 1,208 citations
- CDD: a curated Entrez database of conserved domain alignments (2003) — 788 citations
- PubChem 2019 update: improved access to chemical data (2018) — 2,935 citations
- PubChem BioAssay: 2017 update (2016) — 590 citations
- An overview of the PubChem BioAssay resource (2009) — 301 citations
- Deciphering Protein–Protein Interactions. Part I. Experimental Techniques and Databases (2007) — 380 citations
- PubChem BioAssay: 2014 update (2013) — 264 citations
- PubChem in 2021: new data content and improved web interfaces (2020) — 3,270 citations
- PubChem 2025 update. (2024) — 1,059 citations
- PubChem 2023 update (2022) — 2,880 citations