David B. Jaffe
Molecular Biology · 2002–2016
A researcher in the Science corpus: 24 papers; trusts 3 researchers and is trusted by 8 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 469 citations into it; #7,641 of 17,773 by trust here, #135 by citations
- Artificial Intelligence — 15 citations into it
Whom David B. Jaffe trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts David B. Jaffe overall
- Mark J. P. Chaisson
- Juliane C. Dohm
- Jason Rafe Miller
- Pavel A. Pevzner
- Mihai Pop
- Sergey Koren
- Michael C. Schatz
- Claudio Lottaz
- David R. Kelley
- Manolis Kellis
Papers from David B. Jaffe's perspective
Ordered by how strongly the researchers David B. Jaffe trusts endorse each paper. Same corpus, a different order for every researcher.
- Base-calling of automated sequencer traces using phred. I. Accuracy assessment.
- An Eulerian path approach to DNA fragment assembly (Proceedings of the National Academy of Sciences of the United States of America)
- Accurate Whole Human Genome Sequencing using Reversible Terminator Chemistry (Nature)
- Whole-genome re-sequencing. (Current Opinion in Genetics and Development)
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- Genome-Wide Mapping of in Vivo Protein-DNA Interactions (Science)
- Adaptive evolution of non-coding DNA in Drosophila (Nature)
- Inaugural Article: Bayesian Markov chain Monte Carlo sequence analysis reveals varying neutral substitution patterns in mammalian evolution
- The Diploid Genome Sequence of an Individual Human (PLoS Biology)
- A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica) (Science)
Their papers
- High-quality draft assemblies of mammalian genomes from massively parallel sequence data (2010) — 1,617 citations
- Genome-wide maps of chromatin state in pluripotent and lineage-committed cells (2007) — 4,315 citations
- ARACHNE: a whole-genome shotgun assembler. (2002) — 690 citations
- Genome-scale DNA methylation maps of pluripotent and differentiated cells (2008) — 2,609 citations
- Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project (2007) — 5,374 citations
- Initial sequence of the chimpanzee genome and comparison with the human genome (2005) — 2,343 citations
- Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries (2011) — 1,169 citations
- Whole-genome sequence assembly for mammalian genomes: Arachne 2. (2003) — 344 citations
- The ENCODE (ENCyclopedia Of DNA Elements) Project (2004) — 2,411 citations
- Assemblathon 1: a competitive assessment of de novo short read assembly methods. (2011) — 544 citations
- Quality scores and SNP detection in sequencing-by-synthesis systems. (2008) — 296 citations
- High-resolution mapping of copy-number alterations with massively parallel sequencing (2008) — 550 citations
- Initial sequencing and comparative analysis of the mouse genome. (2002) — 4,291 citations
- Solution Hybrid Selection with Ultra-long Oligonucleotides for Massively Parallel Targeted Sequencing (2009) — 1,475 citations
- Characterizing and measuring bias in sequence data (2013) — 913 citations
- Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype (2004) — 1,970 citations
- The genome sequence of the filamentous fungus Neurospora crassa (2003) — 1,709 citations
- Direct determination of diploid genome sequences (2016) — 754 citations
- Insights from the genome of the biotrophic fungal plant pathogen Ustilago maydis (2006) — 1,189 citations
- The genomic substrate for adaptive radiation in African cichlid fish (2014) — 934 citations