A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene.
By Ji Luo, Michael J. Emanuele, Danan Li, Chad Creighton, M. Schlabach, Thomas F. Westbrook, Kwok-kin Wong, Stephen J. Elledge. Cell, 2009
1,047 citations recorded by the source corpus.
Subfields: Cell Biology, Molecular Biology, Oncology
View Paper: https://www.semanticscholar.org/paper/a48d30b029e2799746a34ecde31cff054e58d9dd
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Cell Biology
- Stephen J. Elledge
- J. Sáez-Rodríguez
- Edward M. Marcotte
- K. Strebhardt
- Alberto Ciccia
- Insuk Lee
- S. Lens
- C. Der
In Molecular Biology
- Stephen J. Elledge
- Alberto Ciccia
- K. Rossman
- C. Der
- J. Sáez-Rodríguez
- Edward M. Marcotte
- Scott W. Lowe
- K. Strebhardt
In Oncology
- Stephen J. Elledge
- K. Strebhardt
- K. Rossman
- G. A. Hobbs
- Alberto Ciccia
- Edward M. Marcotte
- Scott W. Lowe
- Martin Blom
Citations in the corpus
- Targeting the cancer kinome through polypharmacology (2010, neutral): “Three recent papers illustrate the power of large-scale RNAi screens to address this problem by looking for genes that are selectively required for the growth of tumour cells expressing an activated KRAS mutant 72–74 .”
- Mixed lineage kinase domain-like is a key receptor interacting protein 3 downstream component of TNF-induced necrosis (2012, methodology): “protein ubiquination, and genes implicated in cancer as described (24).”
- Prioritizing candidate disease genes by network-based boosting of genome-wide association data. (2011, background): “The second found genes acting as synthetic lethal interaction partners with oncogenic KRAS mutants expressed in a colorectal cancer cell line, screening for genes whose knockdown in the activated KRAS background resulted in cellular lethality (Luo et al. 2009).”
- An interactive resource to identify cancer genetic and lineage dependencies targeted by small molecules (2013, methodology): “Exploiting oncogene-induced dependencies contrasts to a related approach based on targeting cellbiological ‘hallmarks’ common to cancers (Hanahan and Weinberg, 2011) without linking these ‘non-oncogene addictions’ to specific genomic alterations (Luo et al., 2009).”
- HSF1 drives a transcriptional program distinct from heat shock to support highly malignant human cancers. (2012, neutral): “The Elledge lab recently conducted a whole-genome siRNA screen to identify genes that are required to maintain growth when cells are transformed with a malignantly activated Ras gene (Luo et al., 2009).”
- The microcosmos of cancer (2012, background): “Such approaches have identified potential targets for KRAS -expressing tumour”
- Multifaceted polo-like kinases: drug targets and antitargets for cancer therapy (2010, background): “A recent study used 74,905 retroviral short hairpin RNAs (shRNAs), targeting 32,293 transcripts, to identify the vulnerabilities of cancers that have oncogenic mutations in the small GTPase Ra”
- A CRISPR Dropout Screen Identifies Genetic Vulnerabilities and Therapeutic Targets in Acute Myeloid Leukemia (2016, background): “Previously, this was typically conducted using RNA interference (RNAi) in the form of short interfering RNA (siRNA) or short hairpin RNA (shRNA) libraries (Boutros and Ahringer, 2008; Luo et al., 2009; Schlabach et al., 2008; Silva et al., 2008; Zuber et al., 2011).”
- The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo (2011, background): “To date, most studies have relied upon clonally derived isolates (9).”
- RAS isoforms and mutations in cancer at a glance (2016, background): “…and glutamine metabolism), (v) unbiased genetic or chemical screens for synthetic lethal interactors (Barbie et al., 2009; Kumar et al., 2012; Luo et al., 2009; Sarthy et al., 2007; Scholl et al., 2009) and (vi) RNA interference (RNAi) of KRAS expression (Pecot et al., 2014; Xue et al.,…”
- Shared and separate functions of polo-like kinases and aurora kinases in cancer (2010, background): “Most recently, tumour cell lines carrying a KRAS-G13D mutation were shown to be hypersensitive to inhibition of PLK1 (Ref”