The profile of repeat‐associated histone lysine methylation states in the mouse epigenome

By J. Martens, Roderick J. O’Sullivan, Ulrich Braunschweig, Susanne Opravil, Martin Radolf, P. Steinlein, T. Jenuwein. EMBO Journal, 2005

700 citations recorded by the source corpus.

Subfields: Molecular Biology

View Paper: https://www.semanticscholar.org/paper/0b7474d544b917b1aac9f327ec81708444989346

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Citations in the corpus

The mammalian epigenome. (2007, background): “A detailed study by Jenuwein and colleagues revealed that LINEs, SINEs, and other interspersed repeats have variable degrees of H3K9, H3K27, and H4K20 methylation (Martens et al., 2005).”
Retrotransposons revisited: the restraint and rehabilitation of parasites. (2008, neutral): “On the other hand, Martens et al. (2005) detected enriched lysine methylation at mouse satellite repeats and IAP retrotransposons but not at L1s and only weakly at B1s.”
Chromatin in pluripotent embryonic stem cells and differentiation (2006, background): “An elevation of repressed heterochromatin marks, including H3-triMeK9, H3-MeK27, H3-diMeK27, H4-diMeK20 and H4-triMeK20, was also observed in repeat sequences and retrotransposons during RA-induced mouse ES-cell differentiatio”
The X and Y Chromosomes Assemble into H2A.Z, Containing Facultative Heterochromatin, following Meiosis (2006, background): “Z is enriched at the pericentric heterochromatin (50) when trimethylated H3 K9 is depleted (38) in extraembryonic cells.”
Transposable elements and the epigenetic regulation of the genome (2007, background): “Nucleosomes that are associated with TEs are enriched for methylation of histone H3 at lysine 9 (H3K9), which is a signal for transcriptionally repressive and inactive chromati”
Quantitative interaction proteomics and genome-wide profiling of epigenetic histone marks and their readers. (2010, background): “Furthermore, ChIP-Seq of the BAC LRWD1-GFP line revealed a strong enrichment on satellite repeats, correlating with high levels of H3K9me3 which is known to be enriched over satellites (Figure 5H) (Martens et al., 2005).”
RNA meets chromatin. (2005, background): “Interestingly, the level of these RNAs is elevated in cells deficient for the SUV39H histone methyltransferases (Martens et al. 2005).”
A bivalent chromatin structure marks key developmental genes in embryonic stem cells. (2006, background): “Repetitive sequences are subject to repressive epigenetic modifications (Arnaud et al., 2000; Lippman et al., 2004; Martens et al., 2005), which might interfere with the function of the bivalent domains and thus be eliminated by selection.”
Differential chromatin marking of introns and expressed exons by H3K36me3 (2009, background): “In mammalian cells, H3K9me3 is enriched in repressed constitutive heterochromatin, repetitive DNA, DNA transposons and other repetitive element”
Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells. (2007, background): “It has been suggested that this potential is related to an unusual chromatin structure or to specific histone modifications (Azuara et al., 2006; Lee et al., 2004; Martens et al., 2005; Meshorer and Misteli, 2006).”
Global transcription in pluripotent embryonic stem cells. (2008, methodology): “Primers for repetitive sequences and transposable elements were as described elsewhere (Martens et al., 2005 ).”
Gene silencing in cancer by histone H3 lysine 27 trimethylation independent of promoter DNA methylation (2008, methodology): “The specificity of the histone modification antibodies used for ChIP was confirmed by ChIP-PCR for control genes using GAPDH and p21 promoters as active gene controls and Alu sequences as silenced gene control”
Transposition Driven Genomic Heterogeneity in the Drosophila Brain: A Dissertation (2012, neutral): “For example, methylation of histone H3 at lysine 9 is a signal for transcriptionally inactive chromatin and is found to be enriched in nucleosomes associated with TE (Gendrel et al., 2002; Martens et al., 2005).”