Matthew Berkeley

Molecular Biology · 2021–2022

A researcher in the Science corpus: 3 papers; trusts 6 researchers and is trusted by 0 researchers here, as inferred from the citation graph.

Subfields

Whom Matthew Berkeley trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

  1. M. Borowiec
  2. Robert M. Waterhouse
  3. Felipe A. Simão
  4. Daniel H. Huson
  5. Siavash Mirarab
  6. Mario Stanke
  7. J. R. Brister

Papers from Matthew Berkeley's perspective

Ordered by how strongly the researchers Matthew Berkeley trusts endorse each paper. Same corpus, a different order for every researcher.

  1. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
  2. Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and…
  3. NCBI Viral Genomes Resource (Nucleic Acids Res.)
  4. BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics (bioRxiv)
  5. OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs
  6. ggplot2 - Elegant Graphics for Data Analysis (2nd Edition)
  7. BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs (Bioinform.)
  8. SEPP: SATe -Enabled Phylogenetic Placement
  9. Fast and sensitive protein alignment using DIAMOND
  10. NCBI Taxonomy: a comprehensive update on curation, resources and tools (Database J. Biol. Databases Curation)

Their papers