Siavash Mirarab
Molecular Biology · 2011–2023
A researcher in the Science corpus: 14 papers; trusts 41 researchers and is trusted by 18 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 214 citations into it; #1,651 of 17,773 by trust here, #3,659 by citations
- Genetics — 105 citations into it; #509 of 6,854 by trust here, #1,025 by citations
- Paleontology — 65 citations into it
- Ecology, Evolution, Behavior and Systematics — 40 citations into it
- Plant Science — 35 citations into it; #2,537 of 8,232 by trust here, #7,799 by citations
- Ecology — 31 citations into it
- Artificial Intelligence — 13 citations into it
- Ecological Modeling — 6 citations into it
Whom Siavash Mirarab trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Alexandros Stamatakis
- Liang Liu
- S. Edwards
- James H. Degnan
- Joseph Heled
- Ziheng Yang
- W. Fletcher
- Bruce Rannala
- Sean R. Eddy
- Morgan N. Price
Who trusts Siavash Mirarab overall
- Erfan Sayyari
- Uyen Mai
- Maryam Rabiee
- S. Baca
- David M. Emms
- Xiaofan Zhou
- Kazutaka Katoh
- Xing‐Xing Shen
- A. Alexander
- Jacob L. Steenwyk
Papers from Siavash Mirarab's perspective
Ordered by how strongly the researchers Siavash Mirarab trusts endorse each paper. Same corpus, a different order for every researcher.
- Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. (Genetics)
- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. (Systematic Biology)
- IS A NEW AND GENERAL THEORY OF MOLECULAR SYSTEMATICS EMERGING? (Evolution; international journal of organic evolution)
- From Gene Trees to Species Trees (SIAM journal on computing (Print))
- BEST: Bayesian estimation of species trees under the coalescent model (Bioinform.)
- Discordance of Species Trees with Their Most Likely Gene Trees (PLoS Genetics)
- Evolutionary trees from DNA sequences: A maximum likelihood approach (Journal of Molecular Evolution)
- The Comparative RNA Web (CRW) Site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
- Gene tree discordance, phylogenetic inference and the multispecies coalescent. (Trends in Ecology & Evolution)
- TNT, a free program for phylogenetic analysis
Their papers
- SEPP: SATe -Enabled Phylogenetic Placement (2011) — 244 citations
- Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information (2018) — 447 citations
- Whole-genome analyses resolve early branches in the tree of life of modern birds (2014) — 1,780 citations
- ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes (2015) — 894 citations
- ASTRAL: genome-scale coalescent-based species tree estimation (2014) — 1,200 citations
- Phylotranscriptomic analysis of the origin and early diversification of land plants (2014) — 1,136 citations
- Fast Coalescent-Based Computation of Local Branch Support from Quartet Frequencies (2016) — 757 citations
- ASTRAL-III: polynomial time species tree reconstruction from partially resolved gene trees (2018) — 2,144 citations
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0 (2020) — 701 citations
- PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences (2015) — 378 citations
- Greengenes2 unifies microbial data in a single reference tree (2023) — 563 citations
- One thousand plant transcriptomes and the phylogenomics of green plants (2019) — 1,332 citations
- TreeShrink: fast and accurate detection of outlier long branches in collections of phylogenetic trees (2018) — 342 citations
- Data access for the 1,000 Plants (1KP) project (2014) — 505 citations