Nicholas A. Bokulich
Molecular Biology · 2012–2020
A researcher in the Science corpus: 13 papers; trusts 28 researchers and is trusted by 1 researcher here, as inferred from the citation graph.
Subfields
- Molecular Biology — 226 citations into it; #17,025 of 17,773 by trust here, #3,681 by citations
- Ecology — 135 citations into it; #10,201 of 10,717 by trust here, #3,841 by citations
- Genetics — 23 citations into it
- Ecology, Evolution, Behavior and Systematics — 7 citations into it
- Nature and Landscape Conservation — 5 citations into it
- Statistics and Probability — 5 citations into it
Whom Nicholas A. Bokulich trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Marti J. Anderson
- Catherine A. Lozupone
- J. Gregory Caporaso
- Rob Knight
- Qiong Wang
- Todd Z. DeSantis
- Morgan N. Price
- Robert C. Edgar
- C. Lauber
- Daniel McDonald
Who trusts Nicholas A. Bokulich overall
- Robert C. Edgar
- K. N. Burns
- M. Estaki
- Julia Goodrich
- Lingjing Jiang
- Gianmaria Califano
- James J Kozich
- Sara C. Di Rienzi
- Isabel Abellan-Schneyder
- A. M. Eren
Papers from Nicholas A. Bokulich's perspective
Ordered by how strongly the researchers Nicholas A. Bokulich trusts endorse each paper. Same corpus, a different order for every researcher.
- Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB (Applied and Environmental Microbiology)
- SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB (Nucleic Acids Research)
- Naïve Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy (Applied and Environmental Microbiology)
- The Ribosomal Database Project: improved alignments and new tools for rRNA analysis
- A core gut microbiome in obese and lean twins (Nature)
- QIIME allows analysis of high-throughput community sequencing data (Nature Methods)
- ARB: a software environment for sequence data. (Nucleic Acids Research)
- Basic local alignment search tool.
- FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments (PLoS ONE)
- UniFrac: a New Phylogenetic Method for Comparing Microbial Communities (Applied and Environmental Microbiology)
Their papers
- Quality-filtering vastly improves diversity estimates from Illumina amplicon sequencing (2012) — 3,985 citations
- Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (2019) — 19,259 citations
- Antibiotics, birth mode, and diet shape microbiome maturation during early life (2016) — 1,267 citations
- Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin (2018) — 4,873 citations
- QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science (2018) — 1,189 citations
- Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer (2016) — 859 citations
- QIIME 2 Enables Comprehensive End‐to‐End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data (2020) — 441 citations
- RESCRIPt: Reproducible sequence taxonomy reference database management (2020) — 846 citations
- Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 (2019) — 686 citations
- Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by vineyard management (2016) — 132 citations
- Vineyard soil bacterial diversity and composition revealed by 16S rRNA genes: Differentiation by geographic features (2015) — 149 citations
- The Soil Microbiome Influences Grapevine-Associated Microbiota (2015) — 842 citations
- Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate (2013) — 908 citations