Andrey D. Prjibelski
Molecular Biology · 2012–2020
A researcher in the Science corpus: 5 papers; trusts 6 researchers and is trusted by 3 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 101 citations into it; #12,410 of 17,773 by trust here, #3,737 by citations
- Genetics — 28 citations into it
- Artificial Intelligence — 8 citations into it
Whom Andrey D. Prjibelski trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Heng Li
- Rayan Chikhi
- Leena Salmela
- Liguo Wang
- Sergey I. Nikolenko
- Daehwan Kim
- Ryan R. Wick
- Elena Bushmanova
- Dmitry Antipov
- Anton I. Korobeynikov
Who trusts Andrey D. Prjibelski overall
Papers from Andrey D. Prjibelski's perspective
Ordered by how strongly the researchers Andrey D. Prjibelski trusts endorse each paper. Same corpus, a different order for every researcher.
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- An Eulerian path approach to DNA fragment assembly (Proceedings of the National Academy of Sciences of the United States of America)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing (J. Comput. Biol.)
- Short read fragment assembly of bacterial genomes. (Genome Research)
- ABySS: a parallel assembler for short read sequence data. (Genome Research)
- IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler (Annual International Conference on Research in Computational Molecular Biology)
- ALLPATHS: de novo assembly of whole-genome shotgun microreads. (Genome Research)
- Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
- Base-calling of automated sequencer traces using phred. I. Accuracy assessment.
Their papers
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing (2012) — 23,317 citations
- Versatile genome assembly evaluation with QUAST-LG (2018) — 1,284 citations
- rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data (2018) — 697 citations
- Using SPAdes De Novo Assembler (2020) — 2,859 citations
- Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products (2013) — 1,116 citations