Dmitry Antipov
Molecular Biology · 2012–2021
A researcher in the Science corpus: 9 papers; trusts 12 researchers and is trusted by 8 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 161 citations into it; #5,961 of 17,773 by trust here, #3,102 by citations
- Ecology — 47 citations into it; #4,196 of 10,717 by trust here, #996 by citations
- Genetics — 37 citations into it; #6,329 of 6,854 by trust here, #3,366 by citations
- Plant Science — 36 citations into it
- Artificial Intelligence — 11 citations into it
Whom Dmitry Antipov trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Alexey A. Gurevich
- Mark J. P. Chaisson
- Vladislav Saveliev
- Guillaume Marçais
- Pavel A. Pevzner
- Christopher J. Lee
- Heng Li
- Sergey Nurk
- Glenn Tesler
- Aleksey V. Zimin
Who trusts Dmitry Antipov overall
- Sergey Nurk
- Sergey Koren
- Dmitry Meleshko
- Andrey D. Prjibelski
- Leena Salmela
- Mikhail Kolmogorov
- Anton I. Korobeynikov
- Ryan R. Wick
- Brian Walenz
- Pavel A. Pevzner
Papers from Dmitry Antipov's perspective
Ordered by how strongly the researchers Dmitry Antipov trusts endorse each paper. Same corpus, a different order for every researcher.
- Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
- An Eulerian path approach to DNA fragment assembly (Proceedings of the National Academy of Sciences of the United States of America)
- Short read fragment assembly of bacterial genomes. (Genome Research)
- ALLPATHS: de novo assembly of whole-genome shotgun microreads. (Genome Research)
- ABySS: a parallel assembler for short read sequence data. (Genome Research)
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing (J. Comput. Biol.)
- IDBA - A Practical Iterative de Bruijn Graph De Novo Assembler (Annual International Conference on Research in Computational Molecular Biology)
- De novo assembly of human genomes with massively parallel short read sequencing. (Genome Research)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
Their papers
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing (2012) — 23,317 citations
- hybridSPAdes: an algorithm for hybrid assembly of short and long reads (2016) — 592 citations
- Versatile genome assembly evaluation with QUAST-LG (2018) — 1,284 citations
- rnaSPAdes: a de novo transcriptome assembler and its application to RNA-Seq data (2018) — 697 citations
- Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads (2013) — 687 citations
- Using SPAdes De Novo Assembler (2020) — 2,859 citations
- Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products (2013) — 1,116 citations
- plasmidSPAdes: Assembling Plasmids from Whole Genome Sequencing Data (2016) — 493 citations
- Critical Assessment of Metagenome Interpretation: the second round of challenges (2021) — 314 citations