E. Zdobnov
Molecular Biology · 2001–2022
A researcher in the Science corpus: 26 papers; trusts 30 researchers and is trusted by 39 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 374 citations into it; #1,062 of 17,773 by trust here, #510 by citations
- Genetics — 130 citations into it; #2,076 of 6,854 by trust here, #451 by citations
- Plant Science — 83 citations into it; #2,597 of 8,232 by trust here, #733 by citations
- Computational Biology & Bioinformatics — 33 citations into it
- Cancer Research — 24 citations into it
- Paleontology — 15 citations into it
Whom E. Zdobnov trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- The Uniprot Consortium
- Jörg Schultz
- Stephen F. Altschul
- Ana Kozomara
- Eugene V. Koonin
- Robert D. Finn
- Kyle Kai-How Farh
- Robert M. Waterhouse
- Kim D. Pruitt
- Robin C. Friedman
Who trusts E. Zdobnov overall
- Huaiyu Mi
- Guillaume Le Blanc
- C. Meehan
- Tom O. Delmont
- Roman A. Laskowski
- Shivashankar H. Nagaraj
- Jeremy Goecks
- Xiang Jia Min
- Nicola J. Mulder
- Ann Hammonds
Papers from E. Zdobnov's perspective
Ordered by how strongly the researchers E. Zdobnov trusts endorse each paper. Same corpus, a different order for every researcher.
- The Pfam protein families database
- Basic local alignment search tool.
- TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
- Recent improvements to the SMART domain-based sequence annotation resource (Nucleic Acids Res.)
- SCOP database in 2002: refinements accommodate structural genomics
- NCBI Reference Sequences: current status, policy and new initiatives (Nucleic Acids Res.)
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
- Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.
- ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons (Nucleic Acids Res.)
- A genomic perspective on protein families.
Their papers
- The InterPro Database, 2003 brings increased coverage and new features (2003) — 727 citations
- The InterPro database, an integrated documentation resource for protein families, domains and functional sites (2001) — 1,112 citations
- Genome sequence of the Brown Norway rat yields insights into mammalian evolution (2004) — 2,140 citations
- InterProScan - an integration platform for the signature-recognition methods in InterPro (2001) — 3,046 citations
- OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs (2018) — 1,000 citations
- OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs (2012) — 395 citations
- Initial sequencing and comparative analysis of the mouse genome. (2002) — 4,291 citations
- The Genome Sequence of the Malaria Mosquito Anopheles gambiae (2002) — 2,077 citations
- Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution (2004) — 2,677 citations
- BUSCO Applications from Quality Assessments to Gene Prediction and Phylogenomics (2017) — 1,909 citations
- BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs (2015) — 11,378 citations
- miRmap: Comprehensive prediction of microRNA target repression strength (2012) — 377 citations
- OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity (2022) — 413 citations
- OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs (2016) — 430 citations
- BUSCO Update: Novel and Streamlined Workflows along with Broader and Deeper Phylogenetic Coverage for Scoring of Eukaryotic, Prokaryotic, and Viral Genomes (2021) — 5,249 citations
- The Ecoresponsive Genome of Daphnia pulex (2011) — 1,240 citations
- The Newick utilities: high-throughput phylogenetic tree processing in the Unix shell (2010) — 715 citations
- The genome of the model beetle and pest Tribolium castaneum (2008) — 1,375 citations
- BUSCO: Assessing Genomic Data Quality and Beyond (2021) — 1,059 citations
- BUSCO: Assessing Genome Assembly and Annotation Completeness. (2019) — 1,968 citations