InterProScan - an integration platform for the signature-recognition methods in InterPro
By E. Zdobnov, Rolf Apweiler. Bioinform., 2001
3,046 citations recorded by the source corpus.
Subfields: Materials Chemistry, Molecular Biology
View Paper: https://www.semanticscholar.org/paper/ffbb338ca39673852ef73e14a9f8512a3d18c4ac
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Materials Chemistry
- Janet M. Thornton
- Roman A. Laskowski
- James D. Watson
- Kenneth H. Wolfe
- A. M. Eren
- Tom O. Delmont
- Robert G. Beiko
- Guillaume Le Blanc
In Molecular Biology
- Paul D. Thomas
- Huaiyu Mi
- Anushya Muruganujan
- Peer Bork
- Janet M. Thornton
- Ivica Letunic
- Alex Bateman
- Kuo-Chen Chou
Citations in the corpus
- The Human Oral Microbiome Database: a web accessible resource for investigating oral microbe taxonomic and genomic information (2010, neutral): “uk/Tools/InterProScan/) (24) against ScanRegExp, BlastProDom, ProfileScan, HMMPfam, superfamily, HMMTigr, Seg, Coil, HMMPIR, FPrintScan and HMMSmart databases (http://www.”
- The InterPro Database, 2003 brings increased coverage and new features (2003, methodology): “The sequence search package, InterProScan (11), has been extended to include all new member databases and data, and the Perl stand-alone version has additional features, including allowance for GO annotation, and the potential to plug in the transmembrane and signal peptide prediction programs TMHMM”
- Marine DNA viral macro- and micro-diversity from pole to pole (2019, methodology): “, 2015), searching for matches against the InterPro protein signature database using InterProScan (Zdobnov and Apweiler, 2001), and running HMM searches against Pfams (Bateman et al.”
- Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences (2010, methodology): “Zdobnov EM, Apweiler R: InterProScan - an integration platform for the signature-recognition methods in InterPro.”
- Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis (2013, methodology): “No orthologs of bacterial genes coding for enzymes involved in symbiotic lipochitooligosaccharide factors (25) were identified.”