A. V. van Dijk
Molecular Biology · 2005–2007
A researcher in the Science corpus: 3 papers; trusts 3 researchers and is trusted by 3 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 35 citations into it; #5,729 of 17,773 by trust here, #8,280 by citations
- Computational Theory and Mathematics — 19 citations into it
- Materials Chemistry — 18 citations into it; #5,165 of 11,513 by trust here, #8,063 by citations
- Computational Biology & Bioinformatics — 8 citations into it
- Computational Chemistry & Drug Discovery — 6 citations into it
Whom A. V. van Dijk trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Rolf Boelens
- Alexandre M. J. J. Bonvin
- Christopher Sander
- Xiang-Jun Lu
- Patrick Aloy
- András Fiser
- A. W. Schüttelkopf
Who trusts A. V. van Dijk overall
- M. V. van Dijk
- Alexandre M. J. J. Bonvin
- D. Ritchie
- Xiang-Jun Lu
- Sérgio Filipe Sousa
- Sjoerd Jacob de Vries
- Rodrigo Vargas Honorato
- S. D. de Vries
Papers from A. V. van Dijk's perspective
Ordered by how strongly the researchers A. V. van Dijk trusts endorse each paper. Same corpus, a different order for every researcher.
- The Protein Data Bank.
- Principles of docking: An overview of search algorithms and a guide to scoring functions
- Database of homology‐derived protein structures and the structural meaning of sequence alignment
- Monte Carlo docking of protein-DNA complexes: incorporation of DNA flexibility and experimental data.
- SWISS-MODEL: an automated protein homology-modeling server
- Assessment of blind predictions of protein–protein interactions: Current status of docking methods
- 3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures.
- Crystallography & NMR system: A new software suite for macromolecular structure determination.
- Structure model of a complex between the factor for inversion stimulation (FIS) and DNA: modeling protein-DNA complexes with dyad symmetry and known protein structures.
- Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics.
Their papers
- HADDOCK versus HADDOCK: New features and performance of HADDOCK2.0 on the CAPRI targets (2007) — 578 citations
- Information-driven protein–DNA docking using HADDOCK: it is a matter of flexibility (2006) — 193 citations
- Data‐driven docking for the study of biomolecular complexes (2005) — 155 citations