S. D. de Vries
Molecular Biology · 2007–2015
A researcher in the Science corpus: 3 papers; trusts 11 researchers and is trusted by 5 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 53 citations into it; #8,962 of 17,773 by trust here, #10,193 by citations
- Materials Chemistry — 26 citations into it
- Computational Theory and Mathematics — 23 citations into it; #10,437 of 12,182 by trust here, #4,199 by citations
- Radiology, Nuclear Medicine and Imaging — 9 citations into it
Whom S. D. de Vries trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Yanay Ofran
- Rong Chen
- Alexandre M. J. J. Bonvin
- Sjoerd Jacob de Vries
- András Fiser
- A. W. Schüttelkopf
- M. V. van Dijk
- Burkhard Rost
- Zhiping Weng
- Rolf Boelens
Who trusts S. D. de Vries overall
- G. V. Zundert
- João P. G. L. M. Rodrigues
- Nelly Andrusier
- J. Lai
- Alexandre M. J. J. Bonvin
- Pei-Zhang Zhou
- Mikael E. Trellet
- M. V. van Dijk
- Alexis Lamiable
Papers from S. D. de Vries's perspective
Ordered by how strongly the researchers S. D. de Vries trusts endorse each paper. Same corpus, a different order for every researcher.
- CAPRI: A Critical Assessment of PRedicted Interactions (Proteins: Structure, Function, and Bioinformatics)
- SWISS-MODEL: an automated protein homology-modeling server
- Analysing six types of protein-protein interfaces. (Journal of Molecular Biology)
- ProMate: a structure based prediction program to identify the location of protein-protein binding sites.
- WHAT IF: a molecular modeling and drug design program.
- The HADDOCK web server for data-driven biomolecular docking (Nature Protocols)
- Protein structure prediction and analysis using the Robetta server
- ZDOCK: An initial‐stage protein‐docking algorithm
- PRODRG: a tool for high-throughput crystallography of protein-ligand complexes.
- Modeller: generation and refinement of homology-based protein structure models.
Their papers
- HADDOCK versus HADDOCK: New features and performance of HADDOCK2.0 on the CAPRI targets (2007) — 578 citations
- CPORT: A Consensus Interface Predictor and Its Performance in Prediction-Driven Docking with HADDOCK (2011) — 308 citations
- Fully Blind Peptide-Protein Docking with pepATTRACT. (2015) — 113 citations