Rodrigo Vargas Honorato
Molecular Biology · 2019–2021
A researcher in the Science corpus: 5 papers; trusts 6 researchers and is trusted by 4 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 163 citations into it; #10,050 of 17,773 by trust here, #10,695 by citations
- Materials Chemistry — 67 citations into it
- Computational Theory and Mathematics — 46 citations into it
Whom Rodrigo Vargas Honorato trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Joël Janin
- M. V. van Dijk
- Alexandre M. J. J. Bonvin
- João P. G. L. M. Rodrigues
- Anna Vangone
- Helen M. Berman
- Luca Monticelli
- Sjoerd Jacob de Vries
- Rolf Boelens
- Jeffrey J. Gray
Who trusts Rodrigo Vargas Honorato overall
Papers from Rodrigo Vargas Honorato's perspective
Ordered by how strongly the researchers Rodrigo Vargas Honorato trusts endorse each paper. Same corpus, a different order for every researcher.
- Assessing predictions of protein–protein interaction: The CAPRI experiment
- HADDOCK: a protein-protein docking approach based on biochemical or biophysical information.
- Docking and scoring protein complexes: CAPRI 3rd Edition
- The HADDOCK web server for data-driven biomolecular docking (Nature Protocols)
- Clustering biomolecular complexes by residue contacts similarity
- Contacts-based prediction of binding affinity in protein–protein complexes (eLife)
- PRODIGY: a web server for predicting the binding affinity of protein-protein complexes (Bioinform.)
- Protein-protein docking with simultaneous optimization of rigid-body displacement and side-chain conformations. (Journal of Molecular Biology)
- Crystallography & NMR system: A new software suite for macromolecular structure determination.
- Prediction of homo- and hetero-protein complexes by protein docking and template-based modeling: a CASP-CAPRI experiment
Their papers
- MARTINI-Based Protein-DNA Coarse-Grained HADDOCKing (2019) — 34 citations
- Blind prediction of homo- and hetero-protein complexes: The CASP13-CAPRI experiment (2019) — 104 citations
- Prediction of protein assemblies, the next frontier: The CASP14-CAPRI experiment (2021) — 103 citations
- Structural Biology in the Clouds: The WeNMR-EOSC Ecosystem (2021) — 676 citations
- Molecular Dynamics Simulations in Drug Discovery and Pharmaceutical Development (2020) — 530 citations