F. Beghini
Molecular Biology · 2017–2023
A researcher in the Science corpus: 10 papers; trusts 3 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 378 citations into it
- Genetics — 60 citations into it
- Paleontology — 10 citations into it
Whom F. Beghini trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Alexandros Stamatakis
- Nicola Segata
- Ben Langmead
- Kazutaka Katoh
- Edoardo Pasolli
- W. Viechtbauer
- Duy Tin Truong
- F. Asnicar
- Eric A. Franzosa
- Catherine A. Lozupone
Papers from F. Beghini's perspective
Ordered by how strongly the researchers F. Beghini trusts endorse each paper. Same corpus, a different order for every researcher.
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- Metagenomic microbial community profiling using unique clade-specific marker genes
- Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
- Community structure and metabolism through reconstruction of microbial genomes from the environment (Nature)
- A human gut microbial gene catalog established by metagenomic sequencing (Nature)
- Human gut microbiome viewed across age and geography (Nature)
- metaSPAdes: a new versatile metagenomic assembler.
- Database resources of the National Center for Biotechnology Information
- Microbial ecology: Human gut microbes associated with obesity (Nature)
- Alterations of the human gut microbiome in liver cirrhosis (Nature)
Their papers
- Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle (2019) — 1,362 citations
- Accessible, curated metagenomic data through ExperimentHub (2017) — 480 citations
- Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation (2019) — 838 citations
- Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome (2018) — 1,085 citations
- Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3 (2020) — 1,805 citations
- Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals (2021) — 795 citations
- Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0 (2020) — 701 citations
- Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4 (2023) — 1,125 citations
- Critical Assessment of Metagenome Interpretation: the second round of challenges (2021) — 314 citations
- Reporting guidelines for Human Microbiome Research: the STORMS checklist (2021) — 401 citations