Alterations of the human gut microbiome in liver cirrhosis

By Nan Qin, Fengling Yang, Ang Li, Edi Prifti, Yanfei Chen, Li Shao, Jing Guo, E. Chatelier, Jian Yao, Lingjiao Wu and 17 more. Nature, 2014

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Microbial strain-level population structure and genetic diversity from metagenomes (2017, neutral): “Interestingly, one of these was specific to the Chinese population, with 71 of its 74 strains derived from the two Chinese sample sets (Qin et al. 2012, 2014).”
Natural history of the infant gut microbiome and impact of antibiotic treatments on strain-level diversity and stability (2015, background): “These studies have largely focused on characterizing healthy adults (1) and finding commonalities among patients suffering from diseases such as inflammatory bowel disease (2, 3), type 2 diabetes (4), obesity (5–9), metabolic disorders (10–15), colorectal cancer (16, 17), liver cirrhosis (18, 19), r”
Gut microbiota dysbiosis contributes to the development of hypertension (2017, methodology): “The cluster groups with at least 50 genes were defined as co-abundance groups (CAGs) [4], and used for further analysis [35].”
Machine Learning Meta-analysis of Large Metagenomic Datasets: Tools and Biological Insights (2016, methodology): “Species belonging to Veillonella and Streptococcus are typical colonizers of the oral cavity, but they are often overgrown in the small intestine in patients affected by liver cirrhosis, thus suggesting the invasion of the gut from the mouth in these patients [33].”