Brian J. Haas
Molecular Biology · 2003–2019
A researcher in the Science corpus: 26 papers; trusts 11 researchers and is trusted by 2 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 361 citations into it; #11,935 of 17,773 by trust here, #384 by citations
- Plant Science — 59 citations into it; #6,378 of 8,232 by trust here, #771 by citations
- Artificial Intelligence — 15 citations into it
Whom Brian J. Haas trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- W. James Kent
- Ben Langmead
- Daehwan Kim
- Steven L. Salzberg
- Cole Trapnell
- Ewan Birney
- Bo Li
- Mark D. Robinson
- Thomas D. Wu
- Marcel H. Schulz
Who trusts Brian J. Haas overall
- Michael Freeling
- Mark Yandell
- Amborella Genome
- Haibao Tang
- Ya Yang
- Brian Tjaden
- Carol Soderlund
- Andrew J. Tritt
- Christopher J. Grassa
- L. Gabriel
Papers from Brian J. Haas's perspective
Ordered by how strongly the researchers Brian J. Haas trusts endorse each paper. Same corpus, a different order for every researcher.
- BLAT--the BLAST-like alignment tool. (Genome Research)
- Ultrafast and memory-efficient alignment of short DNA sequences to the human genome (Genome Biology)
- RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. (Genome Research)
- Basic local alignment search tool.
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
- edgeR: a Bioconductor package for differential expression analysis of digital gene expression data (Bioinform.)
- Spontaneous mapping of number and space in adults and young children (Cognition)
- Genome-Wide Mapping of in Vivo Protein-DNA Interactions (Science)
- The Sequence Alignment/Map format and SAMtools (Bioinform.)
- The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing (Science)
Their papers
- Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons. (2011) — 3,331 citations
- A framework for human microbiome research (2012) — 2,418 citations
- Structure, Function and Diversity of the Healthy Human Microbiome (2012) — 10,771 citations
- Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies. (2003) — 2,153 citations
- A Catalog of Reference Genomes from the Human Microbiome (2010) — 715 citations
- Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans (2009) — 1,454 citations
- Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells (2015) — 666 citations
- Trinity: reconstructing a full-length transcriptome without a genome from RNA-Seq data (2011) — 17,679 citations
- De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity (2013) — 7,396 citations
- The TIGR Rice Genome Annotation Resource: improvements and new features (2006) — 1,209 citations
- Macronuclear Genome Sequence of the Ciliate Tetrahymena thermophila, a Model Eukaryote (2006) — 764 citations
- DAGchainer: a tool for mining segmental genome duplications and synteny (2004) — 385 citations
- Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments (2007) — 3,430 citations
- The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease (2005) — 1,399 citations
- The Genome of the Basidiomycetous Yeast and Human Pathogen Cryptococcus neoformans (2005) — 733 citations
- Next-generation characterization of the Cancer Cell Line Encyclopedia (2019) — 2,830 citations
- Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods (2019) — 532 citations
- A tissue-mapped axolotl de novo transcriptome enables identification of limb regeneration factors (2017) — 845 citations
- De novo transcript sequence reconstruction from RNA-Seq: reference generation and analysis with Trinity (2013) — 348 citations
- The genome of the blood fluke Schistosoma mansoni (2009) — 1,033 citations