Patrice Koehl

Molecular Biology · 2000–2018

A researcher in the Science corpus: 11 papers; trusts 10 researchers and is trusted by 49 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 30 citations into it; #793 of 17,773 by trust here, #3,389 by citations
• Computational Biology & Bioinformatics — 23 citations into it
• Materials Chemistry — 13 citations into it; #468 of 11,513 by trust here, #3,417 by citations

Whom Patrice Koehl trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Steven E. Brenner
2. W. Kabsch
3. Alexey G. Murzin
4. Stephen F. Altschul
5. Christine A. Orengo
6. Marc Delarue
7. Ivet Bahar

Who trusts Patrice Koehl overall

1. Jinbo Xu
2. John-Marc Chandonia
3. Robert C. Edgar
4. Anne-Florence Bitbol
5. Inbal Budowski-Tal
6. Naomi Fox
7. Erik S. Wright
8. Zhiyong Wang
9. Guoli Wang
10. Rachel Kolodny

Papers from Patrice Koehl's perspective

Ordered by how strongly the researchers Patrice Koehl trusts endorse each paper. Same corpus, a different order for every researcher.

1. The Protein Data Bank.
2. The SWISS-PROT protein sequence data bank and its supplement TrEMBL
3. The InterPro Database, 2003 brings increased coverage and new features (Nucleic Acids Res.)
4. SCOP database in 2002: refinements accommodate structural genomics
5. ASTRAL compendium enhancements
6. MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
7. Errors in protein structures
8. Hidden Markov models in computational biology. Applications to protein modeling.
9. RASMOL: biomolecular graphics for all.
10. The Protein Data Bank

Their papers

• The ASTRAL compendium for protein structure and sequence analysis (2000) — 511 citations
• The ASTRAL Compendium in 2004 (2003) — 574 citations
• Small libraries of protein fragments model native protein structures accurately. (2002) — 214 citations
• BAliBASE 3.0: Latest developments of the multiple sequence alignment benchmark (2005) — 445 citations
• ASTRAL compendium enhancements (2002) — 146 citations
• Comprehensive evaluation of protein structure alignment methods: scoring by geometric measures. (2005) — 316 citations
• NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis (2006) — 319 citations
• Faculty Opinions recommendation of Assessment of contact predictions in CASP12: Co-evolution and deep learning coming of age. (2018) — 4 citations
• Faculty Opinions recommendation of Large-scale determination of previously unsolved protein structures using evolutionary information. (2016) — 95 citations
• Plant NBS-LRR proteins: adaptable guards (2006) — 948 citations
• Faculty Opinions recommendation of Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences.