ASTRAL compendium enhancements
By John-Marc Chandonia, Nigel S. Walker, Loredana Lo Conte, Patrice Koehl, Michael Levitt, Steven E. Brenner. 2002
146 citations recorded by the source corpus.
Subfields: Materials Chemistry, Molecular Biology
How researchers see this paper
The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.
In Materials Chemistry
- Steven E. Brenner
- John-Marc Chandonia
- Naomi Fox
- Alexey G. Murzin
- Cyrus Chothia
- Loredana Lo Conte
- Nigel S. Walker
- Michael Levitt
In Molecular Biology
- Steven E. Brenner
- John-Marc Chandonia
- Naomi Fox
- Cyrus Chothia
- Alexey G. Murzin
- Michael Levitt
- Loredana Lo Conte
- Nigel S. Walker
Citations in the corpus
- SCOPe: Structural Classification of Proteins—extended, integrating SCOP and ASTRAL data and classification of new structures (2013, methodology): “The SCOPe website offers a modest redesign of the SCOP website, presenting all SCOPe, SCOP and ASTRAL data through a single, unified web interface.”
- Protein database searches using compositionally adjusted substitution matrices (2005, methodology): “The second is the “astral40” data set [30,31], based upon the SCOP [32,33] structure-based protein classification.”
- SCOPe: Manual Curation and Artifact Removal in the Structural Classification of Proteins – extended Database (2016, background): “M SCOPe continues high quality manual classification of new superfamilies, a key feature of SCOP.”
- The ASTRAL Compendium in 2004 (2003, methodology): “Two sets (the genetic domain sets) include the genetic domain sequences described previously (5), and the other two (the original-style sequence sets) use the prior method of splitting each multi-chain domain into multiple sequences (4).”
- GlobPlot: exploring protein sequences for globularity and disorder (2003, methodology): “uk/scop/ (27, 28 )]. The frequencies RC and SS for each amino acid were calculated from this dataset.”
- SCOP database in 2002: refinements accommodate structural genomics (2002, methodology): “It also accepts ASTRAL identifiers, including those for the new genetic domain sequences (5).”