Chad Nusbaum

Molecular Biology · 2001–2020

A researcher in the Science corpus: 42 papers; trusts 6 researchers and is trusted by 10 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 691 citations into it; #6,637 of 17,773 by trust here, #27 by citations
• Cancer Research — 113 citations into it; #1,354 of 1,780 by trust here, #287 by citations
• Computational Biology & Bioinformatics — 32 citations into it
• Artificial Intelligence — 23 citations into it

Whom Chad Nusbaum trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Heng Li

Who trusts Chad Nusbaum overall

1. David P. Bartel
2. Mihai Pop
3. Daniel R. Zerbino
4. B. Faircloth
5. Rory Stark
6. Cole Trapnell
7. Eric S. Lander
8. Pavel A. Pevzner
9. Johannes Rinn
10. Elaine R. Mardis

Papers from Chad Nusbaum's perspective

Ordered by how strongly the researchers Chad Nusbaum trusts endorse each paper. Same corpus, a different order for every researcher.

1. Basic local alignment search tool.
2. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome (Genome Biology)
3. Accurate Whole Human Genome Sequencing using Reversible Terminator Chemistry (Nature)
4. Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing (Nature Methods)
5. The human genome browser at UCSC.
6. Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
7. Genome-Wide Mapping of in Vivo Protein-DNA Interactions (Science)
8. An Eulerian path approach to DNA fragment assembly (Proceedings of the National Academy of Sciences of the United States of America)
9. The microRNAs of Caenorhabditis elegans. (Genes & Development)
10. An Extensive Class of Small RNAs in Caenorhabditis elegans (Science)

Their papers

• Initial sequencing and analysis of the human genome (2001) — 24,262 citations
• High-quality draft assemblies of mammalian genomes from massively parallel sequence data (2010) — 1,617 citations
• Genome-wide maps of chromatin state in pluripotent and lineage-committed cells (2007) — 4,315 citations
• Genome-scale DNA methylation maps of pluripotent and differentiated cells (2008) — 2,609 citations
• Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements. (2006) — 1,224 citations
• Model-based Analysis of ChIP-Seq (MACS) (2008) — 16,943 citations
• Ab initio reconstruction of transcriptomes of pluripotent and lineage committed cells reveals gene structures of thousands of lincRNAs (2010) — 1,265 citations
• A framework for human microbiome research (2012) — 2,418 citations
• Structure, Function and Diversity of the Healthy Human Microbiome (2012) — 10,771 citations
• Mammalian microRNAs: experimental evaluation of novel and previously annotated genes. (2010) — 847 citations
• Analyzing and minimizing PCR amplification bias in Illumina sequencing libraries (2011) — 1,169 citations
• Large-scale sequencing reveals 21U-RNAs and additional microRNAs and endogenous siRNAs in C. elegans. (2006) — 1,025 citations
• Comprehensive comparative analysis of strand-specific RNA sequencing methods (2010) — 781 citations
• Quality scores and SNP detection in sequencing-by-synthesis systems. (2008) — 296 citations
• High-resolution mapping of copy-number alterations with massively parallel sequencing (2008) — 550 citations
• Initial sequencing and comparative analysis of the mouse genome. (2002) — 4,291 citations
• Solution Hybrid Selection with Ultra-long Oligonucleotides for Massively Parallel Targeted Sequencing (2009) — 1,475 citations
• Characterizing and measuring bias in sequence data (2013) — 913 citations
• A Catalog of Reference Genomes from the Human Microbiome (2010) — 715 citations
• Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype (2004) — 1,970 citations