Jue Ruan
Molecular Biology · 2005–2019
A researcher in the Science corpus: 12 papers; trusts 10 researchers and is trusted by 51 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 185 citations into it; #765 of 17,773 by trust here, #229 by citations
- Plant Science — 69 citations into it
- Ecology — 14 citations into it; #6,025 of 10,717 by trust here, #7,367 by citations
- Computational Biology & Bioinformatics — 13 citations into it
- Artificial Intelligence — 11 citations into it; #18,567 of 35,345 by trust here, #1,325 by citations
Whom Jue Ruan trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Temple F. Smith
- Robert C. Edgar
- Michael S. Waterman
- Heng Li
- Kevin P. O'Brien
- Eugene V. Koonin
- Stéphane Guindon
- Daniel R. Zerbino
- Zemin Ning
- Sean R. Eddy
Who trusts Jue Ruan overall
- Robert Vaser
- Heng Li
- Mihai Pop
- Yunhao Wang
- Steven L. Salzberg
- Todd J. Treangen
- P. Park
- David R. Kelley
- Ben Langmead
- Mile Sikic
Papers from Jue Ruan's perspective
Ordered by how strongly the researchers Jue Ruan trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- The Pfam protein families database
- Identification of common molecular subsequences.
- The human genome browser at UCSC.
- Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing (Nature Methods)
- Basic local alignment search tool.
- Multiple sequence alignment using partial order graphs
- Whole-genome re-sequencing. (Current Opinion in Genetics and Development)
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. (Systematic Biology)
Their papers
- The Sequence Alignment/Map format and SAMtools (2009) — 56,954 citations
- Mapping short DNA sequencing reads and calling variants using mapping quality scores. (2008) — 1,205 citations
- De novo assembly of human genomes with massively parallel short read sequencing. (2010) — 2,937 citations
- The diploid genome sequence of an Asian individual (2008) — 987 citations
- Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome (2019) — 1,512 citations
- TreeFam: a curated database of phylogenetic trees of animal gene families (2005) — 506 citations
- The sequence and de novo assembly of the giant panda genome (2009) — 1,210 citations
- Fast and accurate long-read assembly with wtdbg2 (2019) — 1,123 citations
- The genome of the cucumber, Cucumis sativus L. (2009) — 1,423 citations
- TreeFam: 2008 Update (2007) — 333 citations
- Genomic variation in 3,010 diverse accessions of Asian cultivated rice (2018) — 1,317 citations
- Genome analysis of Taraxacum kok-saghyz Rodin provides new insights into rubber biosynthesis (2018) — 131 citations