Dylan Chivian
Molecular Biology · 2001–2020
A researcher in the Science corpus: 9 papers; trusts 8 researchers and is trusted by 46 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 119 citations into it; #778 of 17,773 by trust here, #2,346 by citations
- Materials Chemistry — 37 citations into it; #1,178 of 11,513 by trust here, #3,558 by citations
- Computational Biology & Bioinformatics — 35 citations into it; #165 of 660 by trust here, #386 by citations
- Spectroscopy — 9 citations into it
Whom Dylan Chivian trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Brian Kuhlman
- David Baker
- K. Simons
- Leszek Rychlewski
- Charles E.M. Strauss
- Stephen F. Altschul
- Charles L. Kooperberg
- Carol A. Rohl
- Richard Bonneau
- Anders Krogh
Who trusts Dylan Chivian overall
- Yang Zhang
- Kristian Kaufmann
- Hahnbeom Park
- Santrupti Nerli
- Sitao Wu
- Sheng Wang
- Bernard O. Offmann
- Sergey Lyskov
- Ben M. Webb
- Gordon Lemmon
Papers from Dylan Chivian's perspective
Ordered by how strongly the researchers Dylan Chivian trusts endorse each paper. Same corpus, a different order for every researcher.
- The Protein Data Bank.
- Rosetta in CASP4: Progress in ab initio protein structure prediction (Proteins: Structure, Function, and Bioinformatics)
- Native protein sequences are close to optimal for their structures.
- Ab initio protein structure prediction of CASP III targets using ROSETTA
- Prediction of protein secondary structure at better than 70% accuracy.
- RMS/Coverage graphs: A qualitative method for comparing three‐dimensional protein structure predictions
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
- The Pfam protein families database
- 3D-Jury: A Simple Approach to Improve Protein Structure Predictions (Bioinform.)
- CASP2: Report on ab initio predictions
Their papers
- Structure prediction for CASP7 targets using extensive all‐atom refinement with Rosetta@home (2007) — 222 citations
- Protein structure prediction and analysis using the Robetta server (2004) — 2,037 citations
- Rosetta in CASP4: Progress in ab initio protein structure prediction (2001) — 316 citations
- Modeling structurally variable regions in homologous proteins with rosetta (2004) — 336 citations
- Physically realistic homology models built with ROSETTA can be more accurate than their templates. (2006) — 174 citations
- Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation (2003) — 188 citations
- A genomic catalog of Earth’s microbiomes (2020) — 743 citations
- MicrobesOnline: an integrated portal for comparative and functional genomics (2009) — 461 citations
- KBase: The United States Department of Energy Systems Biology Knowledgebase (2018) — 1,390 citations