Jay W. Ponder

Molecular Biology · 1987–2018

A researcher in the Science corpus: 7 papers; trusts 4 researchers and is trusted by 10 researchers here, as inferred from the citation graph.

Subfields

Whom Jay W. Ponder trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

  1. W. L. Jorgensen
  2. David A. Case
  3. Bernard R. Brooks
  4. Alexander D. MacKerell
  5. Donald Bashford
  6. Peter A. Kollman
  7. Ayori Mitsutake
  8. Junmei Wang
  9. Michael W. Mahoney
  10. Nicolas Foloppe

Who trusts Jay W. Ponder overall

  1. I. Samish
  2. Freddie R. Salsbury Jr.
  3. Andrew Leaver-Fay
  4. I. Korendovych
  5. J. Desjarlais
  6. Zsolt Bikádi
  7. M. Bower
  8. Hans Senn
  9. David Baker
  10. Eugene I. Shakhnovich

Papers from Jay W. Ponder's perspective

Ordered by how strongly the researchers Jay W. Ponder trusts endorse each paper. Same corpus, a different order for every researcher.

  1. Accelerated Poisson–Boltzmann calculations for static and dynamic systems (Journal of Computational Chemistry)
  2. Comparison of simple potential functions for simulating liquid water
  3. Force Field Validation Using Protein Side Chain Prediction
  4. New spherical‐cutoff methods for long‐range forces in macromolecular simulation
  5. Efficient particle-mesh Ewald based approach to fixed and induced dipolar interactions
  6. Theory of intermolecular forces
  7. All‐atom empirical force field for nucleic acids: I. Parameter optimization based on small molecule and condensed phase macromolecular target data
  8. Generalized born models of macromolecular solvation effects. (Annual review of physical chemistry (Print))
  9. Theory and applications of the generalized born solvation model in macromolecular simulations (Biopolymers)
  10. CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

Their papers