Donald Bashford
Molecular Biology · 1998–2004
A researcher in the Science corpus: 4 papers; trusts 5 researchers and is trusted by 19 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 9 citations into it; #2,319 of 17,773 by trust here, #5,504 by citations
Whom Donald Bashford trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Donald Bashford overall
- Michael Feig
- David A. Case
- F. Boas
- Gregory Sliwoski
- Chayan Acharya
- Junmei Wang
- Jay W. Ponder
- Charles L. Brooks III
- Alexey V. Onufriev
- John Karanicolas
Papers from Donald Bashford's perspective
Ordered by how strongly the researchers Donald Bashford trusts endorse each paper. Same corpus, a different order for every researcher.
- Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. (Accounts of Chemical Research)
- Accelerated Poisson–Boltzmann calculations for static and dynamic systems (Journal of Computational Chemistry)
- Theory and applications of the generalized born solvation model in macromolecular simulations (Biopolymers)
- Effective Born radii in the generalized Born approximation: The importance of being perfect (Journal of Computational Chemistry)
- Numerical recipes in C
- Prediction of HIV-1 integrase/viral DNA interactions in the catalytic domain by fast molecular docking.
- Modelling repressor proteins docking to DNA
- Molecular surface recognition: determination of geometric fit between proteins and their ligands by correlation techniques.
- Principles of docking: An overview of search algorithms and a guide to scoring functions
- Structure model of a complex between the factor for inversion stimulation (FIS) and DNA: modeling protein-DNA complexes with dyad symmetry and known protein structures.
Their papers
- Generalized born models of macromolecular solvation effects. (2000) — 1,005 citations
- Exploring protein native states and large‐scale conformational changes with a modified generalized born model (2004) — 2,370 citations
- Effective Born radii in the generalized Born approximation: The importance of being perfect (2002) — 434 citations
- All-atom empirical potential for molecular modeling and dynamics studies of proteins. (1998)