Nicole T. Perna
Molecular Biology · 2001–2010
A researcher in the Science corpus: 7 papers; trusts 12 researchers and is trusted by 14 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 39 citations into it; #4,037 of 17,773 by trust here, #3,963 by citations
- Plant Science — 8 citations into it; #1,441 of 8,232 by trust here, #2,581 by citations
- Ecology — 7 citations into it
- Endocrinology — 5 citations into it
- Food Science — 5 citations into it; #392 of 1,700 by trust here, #200 by citations
Whom Nicole T. Perna trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts Nicole T. Perna overall
- Min Jee Kim
- Todd J. Treangen
- Arthur L. Delcher
- Xinlong Wan
- Brian D. Ondov
- Adam M. Phillippy
- Aaron E. Darling
- Andrzej Zielezinski
Papers from Nicole T. Perna's perspective
Ordered by how strongly the researchers Nicole T. Perna trusts endorse each paper. Same corpus, a different order for every researcher.
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
- Basic local alignment search tool.
- T-Coffee: A novel method for fast and accurate multiple sequence alignment.
- Aligning multiple genomic sequences with the threaded blockset aligner. (Genome Research)
- Multiple sequence alignment using partial order graphs
- Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs. (Genome Research)
- Biological sequence analysis
- Human and mouse gene structure: comparative analysis and application to exon prediction (Annual International Conference on Research in Computational Molecular Biology)
- ProbCons: Probabilistic consistency-based multiple sequence alignment. (Genome Research)
- A Linear-Time Algorithm for Computing Inversion Distance between Signed Permutations with an Experimental Study (Workshop on Algorithms and Data Structures)
Their papers
- Escherichia coli K-12: a cooperatively developed annotation snapshot—2005 (2006) — 631 citations
- Mauve: multiple alignment of conserved genomic sequence with rearrangements. (2004) — 4,641 citations
- progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement (2010) — 3,755 citations
- Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli (2002) — 1,542 citations
- Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes (2004) — 724 citations
- Reordering contigs of draft genomes using the Mauve Aligner (2009) — 548 citations
- Genome sequence of enterohaemorrhagic Escherichia coli O157:H7 (2001) — 2,096 citations