John A. Stamatoyannopoulos
Artificial Intelligence · 2004–2015
A researcher in the Science corpus: 28 papers; trusts 1 researcher and is trusted by 16 researchers here, as inferred from the citation graph.
Subfields
- Artificial Intelligence — 13 citations into it
Whom John A. Stamatoyannopoulos trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
Who trusts John A. Stamatoyannopoulos overall
- Timothy L. Bailey
- David R. Kelley
- Yang Yang
- Shashank Singh
- Daniel Quang
- Xiaoyong Pan
- Alex Finnegan
- Daniel E. Newburger
- Yanrong Ji
- Utz J. Pape
Papers from John A. Stamatoyannopoulos's perspective
Ordered by how strongly the researchers John A. Stamatoyannopoulos trusts endorse each paper. Same corpus, a different order for every researcher.
- Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome (Nature Genetics)
- Control of developmental regulators by Polycomb in human embryonic stem cells. (Cell)
- FAIRE (Formaldehyde-Assisted Isolation of Regulatory Elements) isolates active regulatory elements from human chromatin. (Genome Research)
- Distribution and intensity of constraint in mammalian genomic sequence. (Genome Research)
- DNA methylation patterns and epigenetic memory.
- Mapping and quantifying mammalian transcriptomes by RNA-Seq (Nature Methods)
- Capturing Chromosome Conformation (Science)
- Genome-scale DNA methylation maps of pluripotent and differentiated cells (Nature)
- Potential etiologic and functional implications of genome-wide association loci for human diseases and traits (Proceedings of the National Academy of Sciences of the United States of America)
- A vision for the future of genomics research (Nature)
Their papers
- The accessible chromatin landscape of the human genome (2012) — 2,728 citations
- Resolving the complexity of the human genome using single-molecule sequencing (2014) — 769 citations
- Global mapping of protein-DNA interactions in vivo by digital genomic footprinting (2009) — 620 citations
- Integrative analysis of 111 reference human epigenomes (2015) — 6,046 citations
- Systematic Localization of Common Disease-Associated Variation in Regulatory DNA (2012) — 3,679 citations
- The ENCODE (ENCyclopedia Of DNA Elements) Project (2004) — 2,411 citations
- The NIH Roadmap Epigenomics Mapping Consortium (2010) — 1,887 citations
- Mapping and sequencing of structural variation from eight human genomes (2008) — 1,208 citations
- Comprehensive mapping of long range interactions reveals folding principles of the human genome (2009) — 8,189 citations
- Chromatin accessibility pre-determines glucocorticoid receptor binding patterns (2011) — 966 citations
- An expansive human regulatory lexicon encoded in transcription factor footprints (2012) — 841 citations
- Quantifying similarity between motifs (2007) — 1,930 citations
- An encyclopedia of mouse DNA elements (Mouse ENCODE) (2012) — 479 citations
- Unsupervised segmentation of continuous genomic data (2007) — 5,326 citations
- A Comparative Encyclopedia of DNA Elements in the Mouse Genome (2014) — 1,618 citations
- Dynamic DNA methylation across diverse human cell lines and tissues (2013) — 705 citations
- Dynamic reprogramming of chromatin accessibility during Drosophila embryo development (2011) — 191 citations
- Defining functional DNA elements in the human genome (2014) — 696 citations
- Comprehensive analysis of the chromatin landscape in Drosophila (2010) — 905 citations
- Topologically-associating domains are stable units of replication-timing regulation (2014) — 841 citations