An encyclopedia of mouse DNA elements (Mouse ENCODE)

By John A. Stamatoyannopoulos, Michael Snyder, Ross C. Hardison, Bing Ren, Thomas R. Gingeras, D. Gilbert, Mark Groudine, M. Bender, R. Kaul, T. Canfield and 75 more. Genome Biology, 2012

479 citations recorded by the source corpus.

To complement the human Encyclopedia of DNA Elements (ENCODE) project and to enable a broad range of mouse genomics efforts, the Mouse ENCODE Consortium is applying the same experimental pipelines developed for human ENCODE to annotate the mouse genome.

Subfields: Genetics, Molecular Biology, Plant Science

View Paper: https://www.semanticscholar.org/paper/6ff2ecc8c0e1913856653ad9338cbe620e7dee55

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Citations in the corpus

Data integration in the era of omics: current and future challenges (2014, background): “…organisms were nearly completed, ENCODE ( Homo Sapiens ), modENCODE ( C . elegans and D . melanogaster [44]), and mouseENCODE ( Mus musculus [55,56]) projects were launched with the common goal of identifying all functional elements within the genome, including “ protein-coding genes,…”
Topologically-associating domains are stable units of replication-timing regulation (2014, unknown): “CH12, MEL, Gm12878, Gm12801, Gm12812, Gm12813, HeLa-S3, HepG2, HUVEC, IMR90, MCF-7, Sk-N-Sh and NHEK cells were obtained and grown according to standard ENCODE cell culture protocols 32 .”
Epigenomic Signatures of Neuronal Diversity in the Mammalian Brain (2015, methodology): “Compared to DNaseI-seq data from the whole cerebrum (Stamatoyannopoulos et al., 2012), nearly all (93”