Shibu Yooseph
Molecular Biology · 2001–2017
A researcher in the Science corpus: 9 papers; trusts 9 researchers and is trusted by 0 researchers here, as inferred from the citation graph.
Subfields
- Molecular Biology — 181 citations into it
- Ecology — 60 citations into it
- Epidemiology — 25 citations into it
- Physiology — 23 citations into it
Whom Shibu Yooseph trusts overall
Their strongest outbound trust, strongest first, inferred from their citations.
- Robert C. Edgar
- Weizhong Li
- Peter J. Turnbaugh
- Stephen F. Altschul
- Lukasz Jaroszewski
- Steven Henikoff
- Stéphane Guindon
- Daniel H. Haft
- Albert-László Barabási
- Eugene W. Myers
Who trusts Shibu Yooseph overall
Papers from Shibu Yooseph's perspective
Ordered by how strongly the researchers Shibu Yooseph trusts endorse each paper. Same corpus, a different order for every researcher.
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
- Basic local alignment search tool.
- MUSCLE: multiple sequence alignment with high accuracy and high throughput.
- InterPro, progress and status in 2005 (Nucleic Acids Res.)
- Comparative Metagenomics of Microbial Communities (Science)
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.
- A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. (Systematic Biology)
- Amino acid substitution matrices from protein blocks.
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
- TIGRFAMs: a protein family resource for the functional identification of proteins (Nucleic Acids Res.)
Their papers
- The Sorcerer II Global Ocean Sampling Expedition: Expanding the Universe of Protein Families (2007) — 858 citations
- The Sequence of the Human Genome (2001) — 6,774 citations
- A framework for human microbiome research (2012) — 2,418 citations
- Structure, Function and Diversity of the Healthy Human Microbiome (2012) — 10,771 citations
- Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea (2017) — 2,110 citations
- Diet and Feeding Pattern Affect the Diurnal Dynamics of the Gut Microbiome (2014) — 792 citations
- Gut microbiome based metagenomic signature for non-invasive detection of advanced fibrosis in human nonalcoholic fatty liver disease (2017) — 758 citations
- SFA-SPA: a suffix array based short peptide assembler for metagenomic data (2015) — 7 citations
- Essential genes of a minimal bacterium. (2006) — 920 citations