Fiona S. L. Brinkman

Molecular Biology · 2000–2022

A researcher in the Science corpus: 17 papers; trusts 1 researcher and is trusted by 2 researchers here, as inferred from the citation graph.

Subfields

• Molecular Biology — 111 citations into it; #17,083 of 17,773 by trust here, #2,549 by citations

Whom Fiona S. L. Brinkman trusts overall

Their strongest outbound trust, strongest first, inferred from their citations.

1. Stephan Waack

Who trusts Fiona S. L. Brinkman overall

1. Geoffrey L. Winsor
2. Beatriz Fernández-Gómez

Papers from Fiona S. L. Brinkman's perspective

Ordered by how strongly the researchers Fiona S. L. Brinkman trusts endorse each paper. Same corpus, a different order for every researcher.

1. Lateral gene transfer and the nature of bacterial innovation (Nature)
2. Pathogenicity islands and the evolution of microbes. (Annual Review of Microbiology)
3. Basic local alignment search tool.
4. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
5. A genomic perspective on protein families.
6. dbSNP: the NCBI database of genetic variation
7. BLAST+: architecture and applications
8. Cytoscape: a software environment for integrated models of biomolecular interaction networks.
9. EMBOSS: the European Molecular Biology Open Software Suite.
10. Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. (Journal of Molecular Biology)

Their papers

• Protein interaction data curation: the International Molecular Exchange (IMEx) consortium (2012) — 509 citations
• Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes (2010) — 669 citations
• Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen (2000) — 4,461 citations
• PSORT-B: improving protein subcellular localization prediction for Gram-negative bacteria (2003) — 445 citations
• PSICQUIC and PSISCORE: accessing and scoring molecular interactions (2011) — 292 citations
• InnateDB: systems biology of innate immunity and beyond—recent updates and continuing curation (2012) — 1,159 citations
• PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes (2010) — 2,426 citations
• CARD 2023: expanded curation, support for machine learning, and resistome prediction at the Comprehensive Antibiotic Resistance Database (2022) — 1,858 citations
• CARD 2020: antibiotic resistome surveillance with the comprehensive antibiotic resistance database (2019) — 2,965 citations
• FoodOn: a harmonized food ontology to increase global food traceability, quality control and data integration (2018) — 375 citations
• IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets (2017) — 1,337 citations
• CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database (2016) — 2,388 citations
• Enhanced annotations and features for comparing thousands of Pseudomonas genomes in the Pseudomonas genome database (2015) — 997 citations
• Whole-genome sequencing and social-network analysis of a tuberculosis outbreak. (2011) — 749 citations
• IslandViewer: an integrated interface for computational identification and visualization of genomic islands (2009) — 412 citations
• The complete genome of Rhodococcus sp. RHA1 provides insights into a catabolic powerhouse (2006) — 681 citations
• IslandPath: aiding detection of genomic islands in prokaryotes (2003) — 387 citations