IslandPath: aiding detection of genomic islands in prokaryotes

By W. Hsiao, I. Wan, Steven J. M. Jones, Fiona S. L. Brinkman. Bioinform., 2003

387 citations recorded by the source corpus.

Subfields: Endocrinology, Food Science, Genetics

View Paper: https://www.semanticscholar.org/paper/6b1e3133d25b19721d1b062772cafdb12b1fec68

How researchers see this paper

The researchers whose trusted networks rank it highest, strongest advocate first. Every researcher gets a different order.

In Endocrinology

1. Robert E. W. Hancock

In Food Science

1. Geoffrey L. Winsor
2. Robert E. W. Hancock

In Genetics

1. Geoffrey L. Winsor
2. Robert E. W. Hancock

Citations in the corpus

• IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets (2017, positive): “Initially published in 2009 (15), IslandViewer was the first webserver integrating three of the most accurate and complementary GI prediction tools; IslandPath-DIMOB (16) based on nucleotide bias and presence of mobility genes, SIGI-HMM (17) based on codon usage bias with a Hidden Markov Model appro”
• Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes (2010, methodology): “To identify genomic islands (GIs), our lab developed IslandViewer (27), a computational tool integrating two sequence composition GI prediction methods, SIGI-HMM (28) and IslandPathDIMOB (29), with a comparative GI prediction method, IslandPick (30).”